Pairwise Alignments

Query, 426 a.a., 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., RsmB/NOP family class I SAM-dependent RNA methyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  124 bits (310), Expect = 7e-33
 Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 6/261 (2%)

Query: 141 GHPGWLLKLLKESYPEQWQQIVEANNS-KAPMWLRVNHQHHTRAEYQALLEQAG--IVTT 197
           G P ++++  K ++ ++W +   A  + +AP+ LRVN    T  E +A L+ AG  +  T
Sbjct: 125 GLPEFVVEDFKATFGDRWAEEAHALMAPRAPIDLRVNDTAATVDEVEAELKVAGLDVSRT 184

Query: 198 PHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLAPQAGELILDCCAAPGGK 257
           P +     +  E P ++  L GF  G   +QD  +Q+         G  ++D CA  GGK
Sbjct: 185 PWSAVGLRMPSEPPPNIQALEGFKAGRFEIQDEGSQVVCWLAGAAPGMTVVDYCAGGGGK 244

Query: 258 TAHILERTP-ESQVVAIDCDETRLKRVRENLQRLELTAQ-VICGDARYPQQWWQGEQFDR 315
           T  + +    + ++VA D    RL+ +R  LQR  + A+ V+ G      +   G Q D 
Sbjct: 245 TLGLAQAMKGQGKLVASDVVNKRLENIRPRLQRAGVEAELVLIGQNGGGLEDLNG-QADL 303

Query: 316 ILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQLKPGGSLVYATCSIT 375
           + +DAPCS +G  RR P+  W   A+++  L  LQ  IL    + +KPGG LVY TCS+ 
Sbjct: 304 VFVDAPCSGSGTWRRRPEDAWRLTAEEVEKLHGLQVRILSQATKLVKPGGRLVYVTCSML 363

Query: 376 PQENRLQVKAFLERTPDARLV 396
            +EN   V AF    PD R V
Sbjct: 364 ARENEASVDAFEAANPDFRPV 384