Pairwise Alignments

Query, 481 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Trk system potassium uptake protein TrkH from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  300 bits (768), Expect = 7e-86
 Identities = 172/489 (35%), Positives = 265/489 (54%), Gaps = 17/489 (3%)

Query: 2   LNLRPITFIIGLVLSKLALFMYVPTLVAFFTGSGGFLDFAQAVIITHLVAFLCLSIGRTE 61
           ++ R IT I+GL++   +  M +P LVA     G    F Q   +   +  +     R E
Sbjct: 1   MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKE 60

Query: 62  HFRLNVRDMFLITSLVWTIASAFAALPFVFIN--HISFTDAYFETMSGLTTTGSTVLSGL 119
              L  R+ FLI  L WT+  +  ALPF+F    +++ TDA+FE+ SGLTTTG+T L GL
Sbjct: 61  KGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGL 120

Query: 120 DDMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTESSD--WSDKSSPRAKT 177
           D +P +IL +R +LQW GG+G IV+AVA+LP+L VGGM+L++ E       +K  PR   
Sbjct: 121 DSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAE 180

Query: 178 VAKNIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRF-SHGAHW 236
            AK +  +Y++LT  C L+    GM  F+AI H+F T++ GG+ST D+S+  F S   + 
Sbjct: 181 TAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINT 240

Query: 237 VGTLFMFLGGLPFLLFVQALRKQSARALLKDEQVRGF----FWLFMISSLLVAGWLWLKN 292
           +  +F+ + G  + L    L  +S +   +D + R F    F L +I +L+    LW  N
Sbjct: 241 IIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLV----LWFHN 296

Query: 293 DY-AILDALRVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKV 351
            Y + L  +  + F +VS+ TT G+  D    W      +       G C+GST GG+KV
Sbjct: 297 VYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKV 356

Query: 352 FRFQIAMALLKKQLLNLIHPSGIFIQRYNKRPVNEEIIRSVVAFGLTFFITIVVLAGALS 411
            R  +      ++L  L+HP+ ++  +   R + E I+ +V  F   + +  +V   A+ 
Sbjct: 357 IRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAII 416

Query: 412 AMGLDSVTSISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILTIL 471
           A G+D  ++ +  V  + N+GPG+G +     NF  +   AKW+L   ML GRLE+ T+L
Sbjct: 417 ATGVDDFSAFASVVATLNNLGPGLGVV---ADNFTSMNPVAKWILIANMLFGRLEVFTLL 473

Query: 472 VLFFPAFWR 480
           VLF P FWR
Sbjct: 474 VLFTPTFWR 482