Pairwise Alignments

Query, 481 a.a., potassium uptake protein TrkH from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Trk system potassium transporter TrkH from Escherichia coli ECRC62

 Score =  300 bits (768), Expect = 7e-86
 Identities = 172/489 (35%), Positives = 265/489 (54%), Gaps = 17/489 (3%)

Query: 2   LNLRPITFIIGLVLSKLALFMYVPTLVAFFTGSGGFLDFAQAVIITHLVAFLCLSIGRTE 61
           ++ R IT I+GL++   +  M +P LVA     G    F Q   +   +  +     R E
Sbjct: 1   MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFFVALAIGSMLWWPNRKE 60

Query: 62  HFRLNVRDMFLITSLVWTIASAFAALPFVFIN--HISFTDAYFETMSGLTTTGSTVLSGL 119
              L  R+ FLI  L WT+  +  ALPF+F    +++ TDA+FE+ SGLTTTG+T L GL
Sbjct: 61  KGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAFFESFSGLTTTGATTLVGL 120

Query: 120 DDMPPSILLWRSILQWLGGVGFIVMAVAVLPMLNVGGMKLFQTESSD--WSDKSSPRAKT 177
           D +P +IL +R +LQW GG+G IV+AVA+LP+L VGGM+L++ E       +K  PR   
Sbjct: 121 DSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQLYRAEMPGPLKDNKMRPRIAE 180

Query: 178 VAKNIVAVYLVLTGLCFLSYIATGMTPFEAINHAFTTLSTGGYSTSDSSMNRF-SHGAHW 236
            AK +  +Y++LT  C L+    GM  F+AI H+F T++ GG+ST D+S+  F S   + 
Sbjct: 181 TAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATIAIGGFSTHDASIGYFDSPTINT 240

Query: 237 VGTLFMFLGGLPFLLFVQALRKQSARALLKDEQVRGF----FWLFMISSLLVAGWLWLKN 292
           +  +F+ + G  + L    L  +S +   +D + R F    F L +I +L+    LW  N
Sbjct: 241 IIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRMFIGVQFTLVVICTLV----LWFHN 296

Query: 293 DY-AILDALRVSMFNIVSVVTTTGYGLDDFTAWGALPSTIFAFLLMAGACSGSTSGGIKV 351
            Y + L  +  + F +VS+ TT G+  D    W      +       G C+GST GG+KV
Sbjct: 297 VYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLPVLLLCSAFIGGCAGSTGGGLKV 356

Query: 352 FRFQIAMALLKKQLLNLIHPSGIFIQRYNKRPVNEEIIRSVVAFGLTFFITIVVLAGALS 411
            R  +      ++L  L+HP+ ++  +   R + E I+ +V  F   + +  +V   A+ 
Sbjct: 357 IRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPERILEAVWGFFSAYALVFIVSMLAII 416

Query: 412 AMGLDSVTSISGAVTAVANVGPGMGSIIGPTGNFAPLPDAAKWLLSFGMLMGRLEILTIL 471
           A G+D  ++ +  V  + N+GPG+G +     NF  +   AKW+L   ML GRLE+ T+L
Sbjct: 417 ATGVDDFSAFASVVATLNNLGPGLGVV---ADNFTSMNPVAKWILIANMLFGRLEVFTLL 473

Query: 472 VLFFPAFWR 480
           VLF P FWR
Sbjct: 474 VLFTPTFWR 482