Pairwise Alignments

Query, 474 a.a., cytochrome c oxidase accessory protein CcoG from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., (Fe-S)-binding protein from Pseudomonas simiae WCS417

 Score =  488 bits (1256), Expect = e-142
 Identities = 239/469 (50%), Positives = 307/469 (65%), Gaps = 2/469 (0%)

Query: 4   DKIDVKDVTPKVFNPKTHKGQGGDRFNPSNRIYVRESKGTYQKLRRYGGWFLLLLFGLVP 63
           ++I V DVTP   +      +  D +    +IY R   G ++ LR  GG  L LL+    
Sbjct: 3   NQIPVHDVTPPAKHTNGSDSKTVDLYASREKIYTRAFTGLFRNLRMLGGAGLFLLYFGTV 62

Query: 64  WISYGDRQAILLDIGNQQFNFFGTTLYPQDLTLLALLFMIAAFGLFFITTFLGRVWCGYL 123
           W+++G  QA+  ++  ++F  FG T +PQD  LL+ + ++AAFGLFFIT + GRVWCGY 
Sbjct: 63  WLNWGGHQAVWWNLPERKFFIFGATFWPQDFILLSGILIVAAFGLFFITVYAGRVWCGYT 122

Query: 124 CPQTVWTFMYIWFEEKLEGNANKRRKQDNSPMTAELVARKTLKHIAWLAIALVTGFTFVG 183
           CPQ+VWT++++W E+  EG+ N+R K D +PM A    RK  KH  WL I  VTG TFVG
Sbjct: 123 CPQSVWTWIFMWCEKVTEGDRNQRIKLDKAPMGANKFLRKFSKHTLWLLIGFVTGMTFVG 182

Query: 184 YFVPIRALVIDFFTLSAAFWPVFWVLFFALCTYGNAGWMRSIMCIHMCPYARFQSAMFDK 243
           YF PIR LV DFFT  A  W  FWV FF L TYGNAGW+R  +CI+MCPYARFQS MFDK
Sbjct: 183 YFSPIRELVFDFFTGQADGWSYFWVGFFTLATYGNAGWLREQVCIYMCPYARFQSVMFDK 242

Query: 244 DTFIVGYDVARGEQRGPRSRKADPKALGLGDCIDCDLCVQVCPTGIDIRDGLQYECINCG 303
           DT IV YD  RGE RGPR +  D KA GLGDCIDC +CVQVCPTGIDIRDGLQ ECI C 
Sbjct: 243 DTLIVSYDPRRGELRGPRKKGVDYKAQGLGDCIDCTMCVQVCPTGIDIRDGLQIECIGCA 302

Query: 304 ACIDACDNTMERMGYAKGLISYTTEHRLSGKHTKVMRPKLLGYGAVFLVMIGLFFAQVAA 363
           ACIDACDN M++M Y +GLISYTTEH LSG+ T  +RP+L+GY  V L MI L  A    
Sbjct: 303 ACIDACDNIMDKMEYPRGLISYTTEHNLSGQKTHKLRPRLIGYALVLLAMISLLVAAFFM 362

Query: 364 VDPAGLTVLRDRTQLFRTNSSGEIENTYNLKVINKTQQPQTYQLSVKGLDPVSWYGKQSV 423
               G  V +DR  L+R N+ G IEN Y+LK++NK Q+  TY L   GL  +   G++ +
Sbjct: 363 RSLVGFDVSKDRV-LYRENAEGRIENVYSLKIMNKDQRDHTYVLDAAGLPDLKLQGRREI 421

Query: 424 VVQPGEVLNLPMTLGAKPENLSSAVTTIQFILHD-ESHQFTLEVESRFI 471
            V  G+++++P+ L + PE L S+   ++FIL D +     +E +SRFI
Sbjct: 422 KVAAGDIVSMPVELSSAPEQLPSSTNEVKFILTDADDASVHIEAKSRFI 470