Pairwise Alignments

Query, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., Competence protein ComM from Xanthobacter sp. DMC5

 Score =  409 bits (1052), Expect = e-118
 Identities = 232/493 (47%), Positives = 312/493 (63%), Gaps = 14/493 (2%)

Query: 13  GVQAPPVTVEVHISNGMPGFTLVGLPETTVKESRDRVRSAIINSRFEFPAKRITVNLAPA 72
           GV+A PV V+VH++ G+P FT+VGLP+  V E+++RVR+A+I S    PA+RITVNLAPA
Sbjct: 12  GVEARPVDVQVHVAAGLPAFTIVGLPDKAVTEAKERVRAALIASGLALPARRITVNLAPA 71

Query: 73  DLPKEGGRFDLPIALGILAASDQIARNKLESYEFIGELALSGEIRGVKGVLPAALAANQV 132
           DLPKEG  +DLPIALG++AA   I  + L  +  +GELAL G I  V GVLPAA+ AN  
Sbjct: 72  DLPKEGSHYDLPIALGLMAAIGAIPGDALTGFTVVGELALDGAIAAVAGVLPAAIGANAR 131

Query: 133 ERCLVVPHSNGDQAALVGVERHKSA-QSLLEVCADLCGQQTLSLFQSSPSVQQVSQTR-D 190
              L+ P   G +AA    +    A QSL+++   + G+Q +   +  P ++    T  D
Sbjct: 132 GHGLICPAPCGAEAAWASPDMDILAPQSLIQLANHMTGRQVMG--RPEPRMKPPGDTMLD 189

Query: 191 LQDIIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCDLLPEMSDEEAMETASIA 250
           L+D+ GQ+  KRALE+AAAG HNLLF+GPPG GK+MLA RL  +LP ++  E ++ + IA
Sbjct: 190 LRDVKGQETAKRALEVAAAGGHNLLFVGPPGAGKSMLAQRLPSILPPLAPAEMLDVSMIA 249

Query: 251 SLTQQEINQHNWKLRPFRAPHHSSSMAALVGGGTIPRPGEISLAHNGLLFLDEMPEFERK 310
           S+     +      RPFRAPHHS+SMAA+VGGG   +PGE+SLAHNG+LFLDE+PEF  +
Sbjct: 250 SVAGTIEDGALMDRRPFRAPHHSASMAAMVGGGAKAKPGEVSLAHNGVLFLDELPEFAPQ 309

Query: 311 VLDSLREPLESGEIVISRAQGKTRFPARFQLVGALNPSPTGY--YEGSQARANPQSILRY 368
           VLDSLR+PLE+GE++I+RA  +  +PARFQL+ A+NP   G     G   +  P+    Y
Sbjct: 310 VLDSLRQPLETGEVLIARANHRVTYPARFQLIAAMNPCRCGRAGEPGFTCKRGPRCADEY 369

Query: 369 LSRLSGPLLDRFDMSIEIPALPKGTLANGGDRGESTAAVRQRVWVARERMLARSGKVNAL 428
            +RLSGP LDR D+ +E+P++    L       E +  V  RV +ARE  L R   +   
Sbjct: 370 QARLSGPFLDRIDIHLEVPSVSASDLVLPAPT-EGSREVAARVAMAREIQLERYAALGRP 428

Query: 429 LQSREIEQYCPLLK-------ADAEFLESALHRLGLSIRAYHRIIKVARTIADLQGEAQI 481
                 E   PLL+       A A  L  A   + LS R YHR++KVART+ADL+G   +
Sbjct: 429 DVRTNAEASGPLLETVATPDSAGAVLLRDAADAMRLSARGYHRVLKVARTLADLEGAEGV 488

Query: 482 ARPHLAEALGYRA 494
            R HLAEAL YRA
Sbjct: 489 GRRHLAEALAYRA 501