Pairwise Alignments

Query, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., recombination factor protein RarA from Pseudomonas simiae WCS417

 Score = 48.9 bits (115), Expect = 4e-10
 Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 38/203 (18%)

Query: 173 LSLFQSSPSVQQVS---QTRDLQDIIGQQ----QGKRALEIAAAGN-HNLLFLGPPGTGK 224
           + LF+S P  Q ++   ++ +L + +GQ+    +GK   E    G  H+++F GPPG GK
Sbjct: 1   MDLFRSDPIAQPLAARLRSTNLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGK 60

Query: 225 TMLASRLCDLLPEMSDEEAMETASIASLTQQEINQHNWKLRPFRAPHHSSSMAALVGGGT 284
           T LA     LL ++SD    ET S      +EI Q         A   +   A   G  T
Sbjct: 61  TTLAR----LLAKVSDAH-FETVSAVLAGVKEIRQ---------AVEVAKQQAGQYGKRT 106

Query: 285 IPRPGEISLAHNGLLFLDEMPEFERKVLDSLREPLESGEIVISRAQGKTRFPARFQLVGA 344
           I             LF+DE+  F +   D+    +E G ++     G T     F+L  A
Sbjct: 107 I-------------LFVDEVHRFNKSQQDAFLPYVEDGTLIFI---GATTENPSFELNNA 150

Query: 345 LNPSPTGYYEGSQARANPQSILR 367
           L      Y   S   A  Q +L+
Sbjct: 151 LLSRARVYVLKSLDEAAMQKLLQ 173