Pairwise Alignments

Query, 507 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., Competence protein ComM from Pseudomonas sp. DMC3

 Score =  492 bits (1266), Expect = e-143
 Identities = 270/495 (54%), Positives = 340/495 (68%), Gaps = 4/495 (0%)

Query: 1   MGLAIIHSRASIGVQAPPVTVEVHISNGMPGFTLVGLPETTVKESRDRVRSAIINSRFEF 60
           M L+I+HSRA IGV+AP VTVEVH++NG+P  T+VGLPE  VKES+DRVRSAIINS  +F
Sbjct: 1   MSLSIVHSRAQIGVEAPAVTVEVHLANGLPSLTMVGLPEAAVKESKDRVRSAIINSGLQF 60

Query: 61  PAKRITVNLAPADLPKEGGRFDLPIALGILAASDQIARNKLESYEFIGELALSGEIRGVK 120
           PA+RIT+NLAPADLPK+GGRFDL IALGIL+AS Q+    L+  E +GELALSG +R V+
Sbjct: 61  PARRITLNLAPADLPKDGGRFDLAIALGILSASVQVPCLTLDEVECLGELALSGAVRPVR 120

Query: 121 GVLPAALAANQVERCLVVPHSNGDQAALVGVERHKSAQSLLEVCADLCGQQTLSLFQSSP 180
           GVLPAALAA +  R LVVP +N ++A L    +  +   LLE  A   G   +  + S  
Sbjct: 121 GVLPAALAARKAGRALVVPRANAEEACLASGLKVFAVDHLLEAVAHFNGHTPVEPYTSDG 180

Query: 181 SVQQVSQTRDLQDIIGQQQGKRALEIAAAGNHNLLFLGPPGTGKTMLASRLCDLLPEMSD 240
            +       DL ++ GQ   KRAL IAAAG HNLLF GPPGTGKT+LASRL  LLP +S+
Sbjct: 181 LMHAAKPYPDLNEVQGQTAAKRALLIAAAGAHNLLFSGPPGTGKTLLASRLPGLLPPLSE 240

Query: 241 EEAMETASIASLTQQEINQHNWKLRPFRAPHHSSSMAALVGGGTIPRPGEISLAHNGLLF 300
            EA+E A+I S+       H W  RPFR PHHS+S  ALVGG + P+PGEI+LAH+G+LF
Sbjct: 241 CEALEVAAIQSVASGVPLTH-WPQRPFRQPHHSASGPALVGGSSKPQPGEITLAHHGVLF 299

Query: 301 LDEMPEFERKVLDSLREPLESGEIVISRAQGKTRFPARFQLVGALNPSPTGYY--EGSQA 358
           LDE+PEF+RKVL+ LREPLESG IVI+RA+ + RFPARFQLV A+NP P GY      + 
Sbjct: 300 LDELPEFDRKVLEVLREPLESGHIVIARAKDRVRFPARFQLVAAMNPCPCGYLGEPSGKC 359

Query: 359 RANPQSILRYLSRLSGPLLDRFDMSIEIPALPKGTLANGGDRGESTAAVRQRVWVARERM 418
              P  + RY ++LSGPLLDR D+ + + A     L      GE++A+    V  ARER 
Sbjct: 360 SCTPDMVQRYRNKLSGPLLDRIDLHLTV-AREATALNPAAKPGENSASAAALVAEARERQ 418

Query: 419 LARSGKVNALLQSREIEQYCPLLKADAEFLESALHRLGLSIRAYHRIIKVARTIADLQGE 478
             R G  NA L    ++++C L  AD  +LE+A  RL LS+R+ HR++KVART+ADL+  
Sbjct: 419 QKRQGCANAFLDLPGLKRHCKLSTADEIWLEAACERLILSLRSAHRLLKVARTLADLEQA 478

Query: 479 AQIARPHLAEALGYR 493
             I R HLAEAL YR
Sbjct: 479 DAITREHLAEALQYR 493