Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  195 bits (496), Expect = 4e-55
 Identities = 103/182 (56%), Positives = 132/182 (72%), Gaps = 3/182 (1%)

Query: 4   LAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYL 63
           L +    VALAEIGDKTQLL+L+LA+R+RKP PIIA I  ATLANHA A  +G     + 
Sbjct: 5   LLVPTAIVALAEIGDKTQLLALILAARFRKPWPIIAGIVAATLANHAAAGAVGAWFGSFF 64

Query: 64  SPDILKWVLVVSFLAMAGWILIPDKLDGEESISTR--GPFVASFIAFFMAEIGDKTQIAT 121
           S  +L W+L  SF A A W L+PDKLD +E+ +TR  GPF+ + IAFF+AEIGDKTQIAT
Sbjct: 65  SDAVLHWILAASFCATALWTLVPDKLDDDEASTTRKFGPFLTTLIAFFLAEIGDKTQIAT 124

Query: 122 SILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMALAT 181
            +L AQY + L  VI+GTTLGML+ANVPVVL G  +A+K+PL LIR++ A  F ++A+  
Sbjct: 125 VMLAAQYPE-LWLVIIGTTLGMLIANVPVVLAGNFAAEKLPLTLIRRLAATAFFILAIVA 183

Query: 182 AF 183
            +
Sbjct: 184 VY 185