Pairwise Alignments

Query, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 187 a.a., Putative transmembrane protein from Variovorax sp. SCN45

 Score =  184 bits (467), Expect = 8e-52
 Identities = 91/181 (50%), Positives = 129/181 (71%), Gaps = 2/181 (1%)

Query: 1   MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVA 60
           M    ++   VALAE+GDKTQLL+LLLA+R+RKP PI+  IF AT+ NHALA  +G  + 
Sbjct: 1   MEAFLVATGVVALAEMGDKTQLLALLLAARFRKPWPIVLGIFAATIINHALAGAVGNYIT 60

Query: 61  DYLSPDILKWVLVVSFLAMAGWILIPDKLDGEES--ISTRGPFVASFIAFFMAEIGDKTQ 118
            +L PD+L+W+L  SF+AMA W+LIPDKLD +++  +S  G F  + IAFF+AE+GDKTQ
Sbjct: 61  HWLGPDVLRWILGGSFIAMAVWMLIPDKLDDDDAPGVSRFGVFGTTVIAFFLAEMGDKTQ 120

Query: 119 IATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMA 178
           IAT +L A++     WV+ GTTLGM+LAN PVV +G     ++P+ L+  ++A +FL + 
Sbjct: 121 IATVMLAARFTQDYFWVVAGTTLGMMLANAPVVWLGDKIVRRVPIKLVHGISAAIFLALG 180

Query: 179 L 179
           +
Sbjct: 181 V 181