Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 810 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Rhodanobacter sp000427505 FW510-R12

 Score = 1030 bits (2663), Expect = 0.0
 Identities = 519/804 (64%), Positives = 632/804 (78%), Gaps = 2/804 (0%)

Query: 3   NNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVVT 62
           ++YDSS+IKVLKGL+AVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYC  + VT
Sbjct: 8   SHYDSSNIKVLKGLEAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCDKVAVT 67

Query: 63  IHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSV 122
           I +D SVSVSD+GRGIP +MHPEE  S AEV+MTVLHAGGKFD NSYKVSGGLHGVGVSV
Sbjct: 68  ILDDGSVSVSDNGRGIPVDMHPEEHRSTAEVVMTVLHAGGKFDANSYKVSGGLHGVGVSV 127

Query: 123 VNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFT-NIEF 181
           VNALS+ + LTIYR G  + Q Y  G P  PL  VG + + GTTVRF PS  TFT NI+F
Sbjct: 128 VNALSDHLWLTIYRDGHEYQQEYALGEPLYPLKEVGPSNKRGTTVRFLPSPATFTSNIDF 187

Query: 182 HYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEKVF 241
           HY+ILAKRLREL+FLNSGV+I+L DER E + D F YEGGI++FV HL + KT +H  V 
Sbjct: 188 HYEILAKRLRELAFLNSGVTIELKDERGEGRADTFAYEGGIRSFVQHLAQMKTALHPNVI 247

Query: 242 HFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDKE 301
             + E +DGI VEVAMQW D + E ++CFTNNIPQRDGGTHL GFR ALTR+L NY++KE
Sbjct: 248 SLSAE-QDGIVVEVAMQWTDSYNEIMFCFTNNIPQRDGGTHLTGFRAALTRSLQNYIEKE 306

Query: 302 GFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLADF 361
           G +K A+ A SGDD REG+ AV+SVKVPDPKFSSQTKDKLVSSEVK+ VE  +NEKL +F
Sbjct: 307 GLAKNAKVALSGDDMREGMIAVLSVKVPDPKFSSQTKDKLVSSEVKTVVEQVINEKLGEF 366

Query: 362 LAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSEL 421
           L E+P+EAK + SK++DAARAREAARKAREMTRRKGALD+AGLPGKLADCQEKDPAL EL
Sbjct: 367 LLEHPNEAKAIASKVVDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALCEL 426

Query: 422 YIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR 481
           ++VEGDSAGGSAKQGRNR+ QA+LPLKGKILNVEKARFD+ML+S EV TLITALG GIG+
Sbjct: 427 FLVEGDSAGGSAKQGRNRRTQAVLPLKGKILNVEKARFDRMLASAEVGTLITALGTGIGK 486

Query: 482 DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKG 541
           DEYNPDKLRYH II+MTDADVDGSHIRTLLLTFFYRQMPELIERG+IYI  PPLYKVK+G
Sbjct: 487 DEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIGLPPLYKVKQG 546

Query: 542 KQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMSRR 601
           KQE YIKD+ A+N + ++ A+D A L    DAP + GE LEKL++ Y  A+  + R++ R
Sbjct: 547 KQELYIKDDAALNDFLISSAVDNAALTYAPDAPPITGEALEKLLRGYQLALDQIARLAHR 606

Query: 602 YPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAELNVY 661
           +  A+L+ L+    I   L +D  A++AW     ++L A  +G   Y + +   A     
Sbjct: 607 FDAAVLNVLLEHQPITPALWSDPVAMQAWLDGAAQRLAASGLGKPHYRLTLRPAAGGQPA 666

Query: 662 LPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPISSFA 721
             ++    HG++H +LL      S E   +  +S+ + G+I+  A ++RG   + + SF 
Sbjct: 667 AIEVVKEQHGLSHTWLLPQPFFASAELRPILAISQQIAGMIQPDAVVRRGNASRGVLSFL 726

Query: 722 AALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFTTL 781
            A +WL+ E+++G SIQR+KGLGEMNP+QLW+TT++P+TRRM+QV IEDA+ AD++F+ L
Sbjct: 727 DARNWLLDEAKKGRSIQRFKGLGEMNPEQLWDTTVNPDTRRMLQVGIEDAIAADQMFSML 786

Query: 782 MGDQVEPRRAFIETNALKVANLDV 805
           MG+ VEPRR FIE NALKVANLD+
Sbjct: 787 MGEAVEPRRDFIEANALKVANLDI 810