Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 806 a.a., DNA gyrase subunit B from Pseudomonas putida KT2440

 Score = 1129 bits (2919), Expect = 0.0
 Identities = 553/806 (68%), Positives = 662/806 (82%), Gaps = 3/806 (0%)

Query: 1   MSNN--YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKD 58
           MS N  YDSSSIKVLKGLDAVRKRPGMYIGDTDDG+GLHHMVFEVVDNSIDEALAG+C D
Sbjct: 1   MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD 60

Query: 59  IVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 118
           I V IH D S+SV D+GRGIP ++H EE VSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
Sbjct: 61  ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV 120

Query: 119 GVSVVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTN 178
           GVSVVNALSEK++LT+ R GKI  QTY HGVPQAP+AVVG++E TGT + F PSA+TF N
Sbjct: 121 GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKN 180

Query: 179 IEFHYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHE 238
           I F +DILAKR+RELSFLNSGV I L DER   K++ F YEGG++AFV +LN NKTP++ 
Sbjct: 181 IHFSWDILAKRIRELSFLNSGVGILLKDERS-GKEEFFKYEGGLRAFVEYLNTNKTPVNS 239

Query: 239 KVFHFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYM 298
           +VFHFN +R+DG+ VEVA+QWND F EN+ CFTNNIPQRDGGTHL GFR +LTR+LN+Y+
Sbjct: 240 QVFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYI 299

Query: 299 DKEGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKL 358
           ++EG +KK + AT+GDDAREGLTA++SVKVPDPKFSSQTKDKLVSSEVK+AVE  MN+  
Sbjct: 300 EQEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYF 359

Query: 359 ADFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPAL 418
           ADFL ENP+EAK V  K+IDAARAREAARKAREMTRRKGALD+AGLPGKLADCQEKDPAL
Sbjct: 360 ADFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPAL 419

Query: 419 SELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCG 478
           SELY+VEGDSAGGSAKQGRNR+ QAILPLKGKILNVEKARFDKM+SSQEV TLITALGCG
Sbjct: 420 SELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCG 479

Query: 479 IGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKV 538
           IGR+EYN DKLRYHNIIIMTDADVDGSHIRTLLLTFF+RQ+PEL+ERGYIYIAQPPLYKV
Sbjct: 480 IGREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKV 539

Query: 539 KKGKQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERM 598
           K+GKQEQYIKD+EAM +Y    A++ A LH++  APA++G  LE LV ++ + +K ++R+
Sbjct: 540 KRGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRL 599

Query: 599 SRRYPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAEL 658
           SR YP  +    +Y+P +  E   D A ++AW  +   +LN+ +     Y+  +  + E 
Sbjct: 600 SRLYPEELTEHFVYLPEVTLEQLGDHAVMQAWLAQFQARLNSSQKSGLAYNASLREDKER 659

Query: 659 NVYLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPIS 718
           NV+LP++++ +HG+      + D   S +Y  + ++   L  L+  GA+++RGER + I 
Sbjct: 660 NVWLPEVEITSHGLASYITFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIV 719

Query: 719 SFAAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELF 778
            F   LDWL+ E+ +  +IQRYKGLGEMNPDQLWETTMDP  RRM++VTIEDA+ AD++F
Sbjct: 720 EFKEGLDWLMNETTKRHTIQRYKGLGEMNPDQLWETTMDPTVRRMLKVTIEDAIAADQIF 779

Query: 779 TTLMGDQVEPRRAFIETNALKVANLD 804
            TLMGD VEPRR FIE+NAL V+NLD
Sbjct: 780 NTLMGDAVEPRRDFIESNALSVSNLD 805