Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 803 a.a., DNA gyrase, B subunit from Enterobacter asburiae PDN3

 Score = 1249 bits (3233), Expect = 0.0
 Identities = 623/806 (77%), Positives = 704/806 (87%), Gaps = 4/806 (0%)

Query: 1   MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIV 60
           MSN+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAG+CKDIV
Sbjct: 1   MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV 60

Query: 61  VTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV 120
           VTIH DNSVSV+DDGRGIPT +HPEE VSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
Sbjct: 61  VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV 120

Query: 121 SVVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTNI- 179
           SVVNALS+K+ L I R GKIH Q Y HGVPQAPLAV G+T++TGT VRFWPS +TFTN+ 
Sbjct: 121 SVVNALSQKLELVIQREGKIHRQLYTHGVPQAPLAVTGDTDKTGTMVRFWPSHETFTNVT 180

Query: 180 EFHYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEK 239
           EF YDILAKRLRELSFLNSGVSI+L D+R+  K+DHF YEGGI+AFV +LN+NKTPIH  
Sbjct: 181 EFEYDILAKRLRELSFLNSGVSIRLKDKRD-GKEDHFHYEGGIKAFVEYLNKNKTPIHPN 239

Query: 240 VFHFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMD 299
           +F+F+ E+ DGI VEVA+QWNDGFQENIYCFTNNIPQRDGGTHLAGFR A+TRTLN YMD
Sbjct: 240 IFYFSTEK-DGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMD 298

Query: 300 KEGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLA 359
           KEG+SKKA+ + +GDDAREGL AVVSVKVPDPKFSSQTKDKLVSSEVKSAVE  MNE L+
Sbjct: 299 KEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLS 358

Query: 360 DFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALS 419
           ++L ENPS+AK V  KIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQE+DPALS
Sbjct: 359 EYLLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALS 418

Query: 420 ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI 479
           ELY+VEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
Sbjct: 419 ELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI 478

Query: 480 GRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVK 539
           GRDEYNPDKLRYH+IIIMTDADVDGSHIRTLLLTFFYRQMPE++ERG++YIAQPPLYKVK
Sbjct: 479 GRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVK 538

Query: 540 KGKQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMS 599
           KGKQEQYIKD+EAM+QYQ+A+A+DGA LH N+ APALAGEPLE+LV ++NA  K++ RM 
Sbjct: 539 KGKQEQYIKDDEAMDQYQIAIALDGATLHANSHAPALAGEPLERLVSEFNATQKMITRME 598

Query: 600 RRYPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAELN 659
           RRYP  +L EL+Y P +     +D+  V  W   LV  LN KE   S +   ++ NA+  
Sbjct: 599 RRYPKTLLKELVYQPTLTEADLSDEQTVTRWVNALVTDLNEKEQHGSMWKCDIQQNAD-K 657

Query: 660 VYLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPISS 719
            + P I+VRTHGV  +Y L  + +   EY ++  L E L GLIE  AFI+RGER QP++S
Sbjct: 658 QFEPIIRVRTHGVDTDYPLEHEFVTGPEYRRICTLGETLRGLIEDDAFIERGERRQPVAS 717

Query: 720 FAAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFT 779
           F  ALDWL+KESRRGL+IQRYKGLGEMNPDQLWETTMDPE+RRM++VT++DA+ AD+LFT
Sbjct: 718 FEQALDWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFT 777

Query: 780 TLMGDQVEPRRAFIETNALKVANLDV 805
           TLMGD VEPRRAFIE NALK AN+D+
Sbjct: 778 TLMGDAVEPRRAFIEENALKAANIDI 803