Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 803 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Dickeya dianthicola ME23

 Score = 1257 bits (3252), Expect = 0.0
 Identities = 626/806 (77%), Positives = 700/806 (86%), Gaps = 4/806 (0%)

Query: 1   MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIV 60
           MSN+YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN+IDEALAGYCKDIV
Sbjct: 1   MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIV 60

Query: 61  VTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV 120
           VTIH DNSVSV DDGRGIPT +H EE VSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
Sbjct: 61  VTIHADNSVSVQDDGRGIPTGIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV 120

Query: 121 SVVNALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTN-I 179
           SVVNALSEK+ L I R GK+H Q Y HGVPQAPL   G+ + TGTTVRFWPS +TFTN +
Sbjct: 121 SVVNALSEKLELVIRREGKVHRQEYRHGVPQAPLGATGDADATGTTVRFWPSLETFTNMV 180

Query: 180 EFHYDILAKRLRELSFLNSGVSIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEK 239
           EF YDILAKRLRELSFLNSGVSI+L DEREE+K DHF YEGGI+AFV +LNRNKTPIH +
Sbjct: 181 EFEYDILAKRLRELSFLNSGVSIRLRDEREENKADHFHYEGGIKAFVEYLNRNKTPIHPQ 240

Query: 240 VFHFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMD 299
           VF+F+ E+ D I VE+AMQWNDGFQENIYCFTNNIPQRDGGTHLAGFR A+TRTLNNYMD
Sbjct: 241 VFYFSAEK-DSIGVEIAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNNYMD 299

Query: 300 KEGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLA 359
           KEG+SKKA+ + +GDDAREGL AVVSVKVPDPKFSSQTKDKLVSSEVKSA+ES MN++L 
Sbjct: 300 KEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSALESLMNDRLV 359

Query: 360 DFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALS 419
           D+L ENP++AK V  KIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQE+DPALS
Sbjct: 360 DYLMENPNDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALS 419

Query: 420 ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI 479
           ELY+VEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
Sbjct: 420 ELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI 479

Query: 480 GRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVK 539
           GRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPE++ERG+++IAQPPLYKVK
Sbjct: 480 GRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVFIAQPPLYKVK 539

Query: 540 KGKQEQYIKDEEAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMS 599
           KGKQEQYIKD+EAM+QYQ+ LA+D A LH NA APALAGEPLEKLV +Y  A KL++RM 
Sbjct: 540 KGKQEQYIKDDEAMDQYQIMLALDSATLHTNAHAPALAGEPLEKLVAEYYGAQKLIDRME 599

Query: 600 RRYPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSVLVEHNAELN 659
           RRYP A+L+ L+Y P +      D+A  + W   L+  LN KE   S YS L+  + E  
Sbjct: 600 RRYPRALLNALVYQPALTEARLNDQAQAQQWIDSLIHYLNEKEQHGSTYSFLLRQSNER- 658

Query: 660 VYLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDGLIEAGAFIKRGERVQPISS 719
            + P ++VRTHGV  +Y L    +   EY K+  L E L GLIE  A+++RGER QP++S
Sbjct: 659 -HEPVLRVRTHGVDSDYALDLAFVQGNEYRKINLLGEKLRGLIEDSAYVERGERKQPVAS 717

Query: 720 FAAALDWLIKESRRGLSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFT 779
           F  ALDWL+KESRRGL+IQRYKGLGEMNP+QLWETTMDPE+RRM++VT++DA+ ADELFT
Sbjct: 718 FEQALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADELFT 777

Query: 780 TLMGDQVEPRRAFIETNALKVANLDV 805
           TLMGD VEPRRAFIE NALK AN+D+
Sbjct: 778 TLMGDAVEPRRAFIEENALKAANIDI 803