Pairwise Alignments

Query, 805 a.a., DNA gyrase subunit B from Vibrio cholerae E7946 ATCC 55056

Subject, 652 a.a., DNA gyrase, B subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  604 bits (1558), Expect = e-177
 Identities = 318/569 (55%), Positives = 399/569 (70%), Gaps = 11/569 (1%)

Query: 5   YDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDIVVTIH 64
           Y + +I++L+GL+AVRKRP MYIGD     GLHH+++EVVDNSIDEALAG+C  I VT+ 
Sbjct: 12  YSAGNIQILEGLEAVRKRPAMYIGDVGV-KGLHHLIWEVVDNSIDEALAGHCDTIHVTVL 70

Query: 65  EDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 124
           EDNSV V D+GRGIPT+MH +EK SA EV+MTVLHAGGKFD ++YKVSGGLHGVGVS VN
Sbjct: 71  EDNSVQVEDNGRGIPTDMHEKEKRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGVSCVN 130

Query: 125 ALSEKVLLTIYRGGKIHSQTYHHGVPQAPLAVVGETERTGTTVRFWPSAQTFTNIEFHYD 184
           ALS  +  T+YR GK+  Q Y  GVPQ  +  +GETE+ GT + F P    FT  E+ Y+
Sbjct: 131 ALSTHLKATVYRNGKVFEQEYSRGVPQTGVTEIGETEKRGTIIHFVPDGDIFTVTEYKYE 190

Query: 185 ILAKRLRELSFLNSGVSIKLTDEREED-----KKDHFMYEGGIQAFVTHLNRNKTPIHEK 239
            +A RLRE++FLN+GV I   D RE D     K D F  EGG+  FV +L+  +  I ++
Sbjct: 191 TIANRLREMAFLNAGVRIFFKDMRELDEEGNPKSDEFFSEGGLIEFVEYLDETREKIIQE 250

Query: 240 VFHFNQEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMD 299
             +   E+ + + V+VAM +N  F EN+  + N I   +GGTH++GFR ALTRTL  Y D
Sbjct: 251 PIYIESEK-NAVPVQVAMSYNSSFSENVVSYVNTINTYEGGTHVSGFRRALTRTLKGYAD 309

Query: 300 KEGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLA 359
           K G   K +   SGDD REGLTAV+SVKV +P+F  QTK KL +SEV SAV+SA++E L 
Sbjct: 310 KSGMLDKVKFDVSGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVVSAVDSAVSEVLQ 369

Query: 360 DFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALS 419
            +L E+P EAK +  K++ AA+AR AARKAREM +RK  L   GLPGKLADC   +P + 
Sbjct: 370 YWLEEHPKEAKIIVGKVVLAAQARHAARKAREMVQRKNVLGGGGLPGKLADCANTNPEVC 429

Query: 420 ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGC-- 477
           ELY+VEGDSAGGSAKQGR+R  QAILPLKGKILNVEKA   K+  + E+  ++TALG   
Sbjct: 430 ELYLVEGDSAGGSAKQGRDRDFQAILPLKGKILNVEKAHEHKIYDNDEIKNILTALGVKF 489

Query: 478 GIGRDEYNPD--KLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPL 535
           G   DE   D   LRYH I+IMTDAD+DGSHIRTL+LT F+R M  LIE GY+YIA PPL
Sbjct: 490 GTAEDEKELDLTNLRYHKIVIMTDADIDGSHIRTLILTLFFRYMRSLIENGYVYIALPPL 549

Query: 536 YKVKKGKQEQYIKDEEAMNQYQVALAMDG 564
           Y +KKGK E+Y   E+   +    +A DG
Sbjct: 550 YLLKKGKDERYCWSEDERIKLTKEMAGDG 578



 Score = 97.4 bits (241), Expect = 2e-24
 Identities = 48/70 (68%), Positives = 55/70 (78%), Gaps = 1/70 (1%)

Query: 735 LSIQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADELFTTLMGDQVEPRRAFIE 794
           + IQRYKGLGEMNP+QLW TTMDPE+R + QVTIE A  AD LF+ LMGD+V PRR FIE
Sbjct: 583 VGIQRYKGLGEMNPEQLWTTTMDPESRTLKQVTIESAAEADHLFSMLMGDEVAPRREFIE 642

Query: 795 TNALKVANLD 804
            NA K A +D
Sbjct: 643 KNA-KYAKID 651