Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., DNA recombination and repair protein RecF from Variovorax sp. SCN45

 Score =  113 bits (283), Expect = 4e-30
 Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 9/236 (3%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M ++RL  +  R      +  + G N + G NG+GKTS+LEA++L+ +GRSF+  +   +
Sbjct: 1   MHVTRLDARGLRRFADVSLLPAPGINLITGENGAGKTSLLEALHLMAYGRSFRGRVRDGL 60

Query: 61  IQ--NECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILP 118
           I+  +   E+FV  +        DQ       +   D +   ++ G +  +L +L   L 
Sbjct: 61  IRAGDPALEVFVEWQEARR----DQRRKAGLRHSGHDWAG--RLDGASVSQLGELCAALA 114

Query: 119 LQLIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRE 178
           +    P    L+T   + RR ++DWG+FH EP F   W R+ R  KQRNALLK+     +
Sbjct: 115 VVSFEPGSHALITGPGEIRRRYLDWGLFHVEPDFTPLWRRYTRALKQRNALLKARARDGQ 174

Query: 179 LSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFD-IDLKYYRGWEKDQ 233
           L  WD+EL+   E + + R+ Y+++L+           P    I L Y  GW +D+
Sbjct: 175 LDAWDRELSDAGEPLSRRRQQYLDELQPRFAAFAAELAPGLGAIRLDYVPGWRRDE 230