Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., DNA replication and repair protein RecF from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  277 bits (708), Expect = 4e-79
 Identities = 151/365 (41%), Positives = 218/365 (59%), Gaps = 7/365 (1%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M LSR+ +   RN+    +  S   N L G NGSGKTSVLEAI+LLG  RSF+SS    +
Sbjct: 1   MSLSRVSVTGVRNLHPVTLSPSPRINILYGANGSGKTSVLEAIHLLGIARSFRSSRLLPV 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           IQ E     V G++    L+       +G+++ R G  +++I GQ  +  AQLA+ILPLQ
Sbjct: 61  IQYEQPSCTVFGQV---DLAQGGHS-NLGVSRDRQGEFQIRIDGQNARSAAQLAEILPLQ 116

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQ-SYREL 179
           LI+P+ F LL   PK RR F+DWGVFH EP F   W R ++  KQRN+ L+         
Sbjct: 117 LINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMATWQRLQKALKQRNSWLRHGTLDAASQ 176

Query: 180 SYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSIL 239
           + WD+EL   +++ID++R +Y+  LK V EQ     +    + L YYRGW+K++   ++L
Sbjct: 177 AAWDRELCSASDEIDEFRRAYIKALKPVFEQTLSELVELEGLTLSYYRGWDKEKELSTVL 236

Query: 240 EKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTG 299
             +  RDQQ+G+T +GP +ADLR+++ A    D+LSRGQ KL+VCALR+AQG  ++++  
Sbjct: 237 ASSIHRDQQMGHTQAGPQRADLRLRLGAHNAADILSRGQQKLVVCALRIAQGHLVSQVRR 296

Query: 300 KQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVAD--MLDESSKTFHVAH 357
            QCIYL+DD  SELD   R+ L   L+    QVF++ + +  + +    +     FHV  
Sbjct: 297 GQCIYLVDDLPSELDDNHRRALCRLLEELRCQVFITCVDQEFLREGWQTETPVALFHVEQ 356

Query: 358 GVIEQ 362
           G I Q
Sbjct: 357 GRITQ 361