Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., DNA recombination and repair protein RecF from Sphingobium sp. HT1-2

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 96/364 (26%), Positives = 158/364 (43%), Gaps = 23/364 (6%)

Query: 3   LSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRIIQ 62
           + RL +  FRN     I     F  L G NG+GKT++LEA+ +L  GR  + +    + +
Sbjct: 2   IGRLTLSDFRNHADALIVPDQPFVLLTGDNGAGKTNILEAVSMLAPGRGLRGAALRAMAR 61

Query: 63  NECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQLI 122
            +    F  G   E     D   L  G++       +V+IGG      A LA  L +  +
Sbjct: 62  QDGGGSF--GIAAE----VDGVVLGTGVSVDAPDRRQVRIGGVASSANA-LADHLSIVWL 114

Query: 123 HPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELSYW 182
            P    L  D P  RR F+D       P       R++   + RN LL   +  R    W
Sbjct: 115 TPAMDRLFLDSPGGRRRFLDRLTLALHPGHAAHSARYEAAMRARNRLLTDLR--RADPAW 172

Query: 183 DQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFD-------IDLKYYRGWEKDQPY 235
              +  L  Q+D+   +      ++  +L R  + + D       I +    G   D+P 
Sbjct: 173 ---IGALEAQMDEHGTALAAARADLVARLNRQLVDQPDEPFARPLIRIAREDG-ASDEPL 228

Query: 236 QSILEKNFERDQQLGYTFSGPNKADLR-IKVNATPVEDVLSRGQLKLMVCALRVAQGQHL 294
              L +   RD   G T SGP++ DL  I +       + S G+ K ++ ++ +A    +
Sbjct: 229 GQRLARERRRDAAAGRTLSGPHRHDLDVIHIAKNQAAALCSTGEQKALLLSILLAHAALV 288

Query: 295 TELTGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSKTFH 354
           +   G+  + L+D+ A+ LD  RR  L D L+ TG QV+++  TE  + + L+ +++  H
Sbjct: 289 SADRGQPPVLLLDEVAAHLDPSRRAALFDRLRETGGQVWMTG-TEDSLFNELNGATR-LH 346

Query: 355 VAHG 358
           V  G
Sbjct: 347 VTAG 350