Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., DNA replication and repair protein from Pseudomonas putida KT2440

 Score =  273 bits (698), Expect = 5e-78
 Identities = 148/367 (40%), Positives = 215/367 (58%), Gaps = 11/367 (2%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M L R+M+   RN+    +  S   N L G NGSGKTSVLEA++LLG  RSF+S+    +
Sbjct: 1   MSLRRIMVTAVRNLHPVTLLPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPV 60

Query: 61  IQNECSELFVHGRI--CEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILP 118
           IQ E +   V G +   E   S+      +G++++R G   ++I GQ  +  AQLA++LP
Sbjct: 61  IQYEQAACTVFGEVQLTEGGTSN------LGVSRERQGEFTIRIDGQNARSAAQLAELLP 114

Query: 119 LQLIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQ-SYR 177
           LQLI+P+ F LL   PK RR F+DWGVFH EP F  AW R ++  +QRN+ L+       
Sbjct: 115 LQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDPA 174

Query: 178 ELSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQS 237
             + WD+EL   + +ID++R +Y+  LK V E+     +    + L YYRGW+KD+  Q 
Sbjct: 175 SQAAWDRELCLASAEIDEYRRNYIKALKPVFERTLSELVELDGLTLSYYRGWDKDRELQE 234

Query: 238 ILEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTEL 297
           +L  +  RDQQ+G+T +GP +ADLR+++      D+LSRGQ KL+VCALR+AQG  +++ 
Sbjct: 235 VLASSLLRDQQMGHTQAGPQRADLRLRLAGNNAADILSRGQQKLVVCALRIAQGHLVSQA 294

Query: 298 TGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVAD--MLDESSKTFHV 355
               CIYL+DD  SELD   R+ L   L+    QVF++ +    + +    +     FHV
Sbjct: 295 RRGHCIYLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHV 354

Query: 356 AHGVIEQ 362
             G I Q
Sbjct: 355 EQGRITQ 361