Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., DNA replication/repair protein RecF from Dickeya dianthicola ME23

 Score =  402 bits (1034), Expect = e-117
 Identities = 198/360 (55%), Positives = 252/360 (70%), Gaps = 5/360 (1%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M L+RL+I+ FRNI++ D+ L  GFNFL+G NGSGKTSVLEAIY LGHGR+F+S    R+
Sbjct: 1   MALTRLLIRDFRNIESADLALIPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSIQAARV 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           I++E +E  +HGRI        + E  VG++K RDG + V+I G  G K+A+LAQ+LP+Q
Sbjct: 61  IRHEQAEFILHGRI-----EGQERERSVGLSKNRDGDSTVRIDGSDGHKVAELAQLLPIQ 115

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELS 180
           LI PEGF LL  GPK RRAF+DWG FH EP FF AW   KRL +QRNA L+    Y +L 
Sbjct: 116 LITPEGFTLLNGGPKYRRAFLDWGCFHNEPGFFSAWSNLKRLLRQRNAALRQVSHYGQLR 175

Query: 181 YWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSILE 240
            WD+EL  LAE I +WR  Y   +       C  FLPEF +   + RGW+K+  Y  +LE
Sbjct: 176 AWDRELVPLAEGISRWRADYSAAIAADIGSTCAQFLPEFSLSFSFQRGWDKESDYAELLE 235

Query: 241 KNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTGK 300
           ++FERD+QLGYT  GP+KAD RI+     VED+LSRGQLKL++CALR+AQG+ LT   G 
Sbjct: 236 RHFERDRQLGYTALGPHKADFRIRAGGVAVEDMLSRGQLKLLMCALRLAQGEFLTRQNGL 295

Query: 301 QCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSKTFHVAHGVI 360
           +C+YLIDDFASELDS RR+ LA+ LK T AQVFVS+IT  Q++DM+ E+ K F V  G I
Sbjct: 296 KCLYLIDDFASELDSTRRRLLAERLKATQAQVFVSAITAEQISDMVGENGKMFRVEQGKI 355