Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., recF protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  105 bits (262), Expect = 2e-27
 Identities = 87/372 (23%), Positives = 181/372 (48%), Gaps = 16/372 (4%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M L  L + QF+N +   +  S   N  +G NGSGKT++L+AI+ L   +S  + +  + 
Sbjct: 1   MHLKSLQLIQFKNYEKALVAFSPEINCFLGINGSGKTNMLDAIHYLSLTKSAFNPVDIQN 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           ++++     + G   + +  S + +  +   K++    +V   G+  +K+++   +LP+ 
Sbjct: 61  VRHDQGFFSMKGEF-DKAGKSVEIQCILEARKKK----QVFNNGKAYEKMSEHIGLLPVV 115

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKS-----AQS 175
           LI P+   L+ +G ++RR F D  +   +  +     R++   KQRNAL+K         
Sbjct: 116 LIAPDDTSLIKEGSEERRKFFDSLLSQLDKNYLGKLVRYQHFLKQRNALIKQFVEQDRMD 175

Query: 176 YRELSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFD-IDLKYYRGWEKDQP 234
              L  +D EL +L++ + + R++++++ K            E + ++++Y    EK   
Sbjct: 176 KNLLEPYDVELIQLSKWLYEHRKAFIDRFKPYLLHHYAEISGEREAVEIRYESQCEKPD- 234

Query: 235 YQSILEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHL 294
           +++      +RD  L  T +G +K D   +++  P++   S+GQ K  + AL++AQ Q  
Sbjct: 235 FEAYFYGCLQRDLILKRTNAGVHKDDFIFEIDGHPLKKFGSQGQQKSFLIALKLAQFQVF 294

Query: 295 TELTGKQCIYLIDDFASELDSLRRQRLADSL-KGTGAQVFVSSITESQVADMLDESSKT- 352
            E TG + + L+DD   +LD  R  ++ + +      Q+F++     +   ++ +     
Sbjct: 295 KEETGTKPLLLLDDIFDKLDDFRIGKMMELVAHHEFGQLFITDARPERTRKIMQDIEADI 354

Query: 353 --FHVAHGVIEQ 362
             FH+  G + +
Sbjct: 355 AYFHIEGGKVSR 366