Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., DNA replication/repair protein RecF from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 99/376 (26%), Positives = 166/376 (44%), Gaps = 23/376 (6%)

Query: 3   LSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRIIQ 62
           ++ L +  FR+     + +++G   L GPNG+GKT++LEAI LL  G+  + +    + +
Sbjct: 2   ITSLTLTDFRSYAGARLEMTSGPVVLHGPNGAGKTNLLEAISLLTPGKGLRGATAAEMGR 61

Query: 63  NECSELFVHGRICEHSLS-SDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQL 121
            E  +    GR     +   D+  L  G+         V+I G+T Q    L  + P+  
Sbjct: 62  REPGQ--ATGRAWAVMVELDDETRLGTGVQAAGAARRIVRIDGETAQPGRLLDYLRPVWA 119

Query: 122 IHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELS- 180
             PE   L +D   +R  F D  VF  +P    +   +++  ++R  LL  AQ  RE   
Sbjct: 120 T-PEQDRLFSDARAERLKFFDRLVFAADPDHAASVSAYEKALRERLRLLNDAQDGREADP 178

Query: 181 -YWDQELARLAE---QIDQWRESYVNQLKNVAEQLCRTFLPEFDIDL------KYYRGWE 230
            + D   ARL E   +    R + ++ L+   +       P+ D+ L          G E
Sbjct: 179 VWLDALEARLGEAGARAALARVAALHALQAAIDARSDRPFPQADLGLDGAAEQMAEAGAE 238

Query: 231 KDQPYQSI---LEKNFERDQQLGYTFSGPNKADLRI--KVNATPVEDVLSRGQLKLMVCA 285
           +D+   +I   L K   RD   G +  GP++ DL    +    P  +  S G+ K +V  
Sbjct: 239 EDEIAAAIREGLAKARARDGAAGRSLFGPHRTDLTALHREKQRPAAEG-SSGEQKALVLN 297

Query: 286 LRVAQGQHLTELTGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADM 345
           L +AQ   L++   +  I L+D+  + LD  RR  L D +     Q F++  TE  +   
Sbjct: 298 LILAQIARLSDHAARP-ILLLDEAPAHLDEARRTALFDEITALDLQAFMTG-TERDLFAG 355

Query: 346 LDESSKTFHVAHGVIE 361
           L+  ++   VA G +E
Sbjct: 356 LEGRAQFVRVAGGALE 371