Pairwise Alignments

Query, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., DNA replication and repair protein RecF from Alteromonas macleodii MIT1002

 Score =  259 bits (663), Expect = 6e-74
 Identities = 138/365 (37%), Positives = 215/365 (58%), Gaps = 7/365 (1%)

Query: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60
           M L R+ I QFRN+ +  +  S     + G NGSGK+S++EA+Y LG GRSF+++    +
Sbjct: 1   MKLDRVQITQFRNLTSVSLSPSPALTIIKGVNGSGKSSLIEALYYLGFGRSFRTNKHSSV 60

Query: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120
           IQNE     V    C+   + +  EL +G  + R+ +    I G+   KL+ L  ++PLQ
Sbjct: 61  IQNEKDSFSVFAS-CK---TEEGDELKLGFQRSRNETFTCSINGEHSNKLSDLVSLVPLQ 116

Query: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQ--SYRE 178
           L  P+  +L+   P +RR F DWG+FH E  F     ++ +  K RNALLK     S  +
Sbjct: 117 LFTPQSTDLIIGSPSERRRFCDWGLFHVEHQFQSLANQYGKFLKHRNALLKQQANLSAPQ 176

Query: 179 LSYWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSI 238
             YW+ + + L E +   R+ YV+ L  + +Q  + FLP FD++L YY+GWEKD      
Sbjct: 177 NQYWESQFSELGESLSATRQEYVDILTPIFKQYAQEFLPNFDVELSYYKGWEKDVGLSES 236

Query: 239 LEKNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELT 298
           L K  E D ++G+T SGP+KADLR+KVN    +++LSRGQL++ V AL+++Q +   + T
Sbjct: 237 LVKKREYDGKIGHTSSGPHKADLRLKVNGVNAQELLSRGQLRMAVAALQMSQTKLFNKAT 296

Query: 299 GKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLD-ESSKTFHVAH 357
            ++ I+L+DD  +ELD+ +R++  D L     QVFV++I  +Q+A +      K FHV H
Sbjct: 297 QRKSIFLLDDVGAELDADKREQFIDGLLKMDTQVFVTAIESTQLAFIQKYNEKKMFHVEH 356

Query: 358 GVIEQ 362
           G +++
Sbjct: 357 GNVKE 361