Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., DNA polymerase III subunit beta from Pseudomonas simiae WCS417

 Score =  391 bits (1004), Expect = e-113
 Identities = 201/369 (54%), Positives = 269/369 (72%), Gaps = 5/369 (1%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           M FTI+R  L+KPLQ V+G +  R +LP+L N+LL VE  QLS+T TDLEVEL+ RV LE
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVRSGRSRFSLATLPASDFPNIE 120
              E G ITVPARK +DIC+ LP+ A+I + ++  ++ V++GRSRF+L+TLPA+DFP +E
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEAKLVVKAGRSRFTLSTLPANDFPTVE 120

Query: 121 DWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVA 180
           +    +  SL Q++LR LIE+T F+MA QDVRYYLNGML E+    +R+VATDGHR+A+ 
Sbjct: 121 EGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSEGIIRAVATDGHRLAM- 179

Query: 181 QAQLGADFAQ---KQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSKLV 237
              + AD  Q    Q+IVPRKG+LEL +LL  PE  V + +G  ++RA    F FTSKLV
Sbjct: 180 -CSMRADIGQPDRHQVIVPRKGILELARLLTEPEGNVSIVLGQHHIRATTGEFTFTSKLV 238

Query: 238 DGRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNP 297
           DG+FPDY RVLP+   K +    + LR+AFSR AILSNEK+RG+R+ LA+  ++I ANNP
Sbjct: 239 DGKFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQANNP 298

Query: 298 EQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENVDDDSA 357
           EQEEAEE + V + G  +EIGFNVSY+LDVL  +  + VR+ +SD+N+SALV+  D+D +
Sbjct: 299 EQEEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDS 358

Query: 358 MYVVMPIRL 366
            YVVMP+RL
Sbjct: 359 AYVVMPMRL 367