Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., DNA polymerase III subunit beta from Pseudomonas putida KT2440

 Score =  389 bits (1000), Expect = e-113
 Identities = 198/369 (53%), Positives = 269/369 (72%), Gaps = 5/369 (1%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           M FTI+R  L+KPLQ V+G +  R +LP+L N+LL V+  QLS+T TDLEVEL+ RV LE
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVRSGRSRFSLATLPASDFPNIE 120
              E G ITVPARK +DIC+ LP+ A+I + ++  ++ V++GRSRF+L+TLPA+DFP +E
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVE 120

Query: 121 DWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMAVA 180
           +    +  +L Q++LR LIE+T F+MA QDVRYYLNGML E+   TLR+V+TDGHR+A+ 
Sbjct: 121 EGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRNTLRAVSTDGHRLAL- 179

Query: 181 QAQLGADFAQK---QIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSKLV 237
              + A   Q+   Q+IVPRKG+LEL +LL  PE  V + +G  ++RA    F FTSKLV
Sbjct: 180 -CSMSAPIEQEDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLV 238

Query: 238 DGRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNP 297
           DG+FPDY RVLP+   K +    + LR+AFSR AILSNEK+RG+R+ LA   ++I ANNP
Sbjct: 239 DGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNP 298

Query: 298 EQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENVDDDSA 357
           EQEEAEE + V +EG  +EIGFNVSY+LDVL  +  + VR+ +SD+N+SAL++   +D +
Sbjct: 299 EQEEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDS 358

Query: 358 MYVVMPIRL 366
            YVVMP+RL
Sbjct: 359 SYVVMPMRL 367