Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., DNA polymerase III, beta subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  179 bits (453), Expect = 1e-49
 Identities = 111/372 (29%), Positives = 193/372 (51%), Gaps = 8/372 (2%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           MKF +  S L+K L  ++G +     +PIL N L +++E +L++TA+DL+  +++ + +E
Sbjct: 1   MKFIVSSSALLKQLSGINGVVTTNPVVPILENFLFEIKEGKLTITASDLQTSMMTEIDVE 60

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDR--IQVRSGRSRFSLATLPASDFPN 118
            + E G+I VPAR  ++  + LP+  V T  ++ D   +++ S   R+ LA   A+DFP 
Sbjct: 61  AK-EDGNIAVPARILMETLKNLPEQPV-TFSIDHDTYSVEISSDNGRYKLAGENATDFPK 118

Query: 119 IEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLFEIDGTTLRSVATDGHRMA 178
           I    +   V ++   L   I  T F+ +N ++R  + G+   +  T    VATDGHR+ 
Sbjct: 119 IPSVSNATAVDMSTDVLSSAINNTIFATSNDELRPAMTGVYVNLSNTNTTFVATDGHRLI 178

Query: 179 VAQAQLGADFAQKQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSKLVD 238
             +    A      IIVPRK +  L   L +   PV ++  +SN   +  +     +LVD
Sbjct: 179 RYRRVDIAAPEAASIIVPRKALNLLKSTLPSENIPVTVEFNNSNAYFKFGNIQMICRLVD 238

Query: 239 GRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNPE 298
            R+PDY  V+P      +     E   +  R AI +N+    VR+ L  + ++I+A + +
Sbjct: 239 ERYPDYENVIPVDNENNMTIDRVEFLSSLRRIAIYANKTTHQVRLKLTGSELQISAEDLD 298

Query: 299 -QEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALV---ENVDD 354
              EA E L    +GE IEIGFN  +++++LN +    V +  S  N + L+   +  ++
Sbjct: 299 FSNEANERLSCEHDGEDIEIGFNAKFLVEMLNNIGSKQVTLKFSAPNRAGLIVPSDKGEN 358

Query: 355 DSAMYVVMPIRL 366
           +  + +VMP+ L
Sbjct: 359 EDILMLVMPVML 370