Pairwise Alignments

Query, 366 a.a., DNA polymerase III subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., DNA polymerase III, beta chain from Agrobacterium fabrum C58

 Score =  258 bits (660), Expect = 1e-73
 Identities = 145/374 (38%), Positives = 226/374 (60%), Gaps = 10/374 (2%)

Query: 1   MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLEVELISRVTLE 60
           M+ T+ERS+L+K L  V   +  R ++PIL N+LL+     L M ATDL++E+       
Sbjct: 1   MRITLERSNLLKSLNHVHRVVERRNTIPILSNVLLRASGANLDMKATDLDLEITEATPAM 60

Query: 61  GEFEAGSITVPARKFLDICRGLPDSAVITVLL--EGDRIQVRSGRSRFSLATLPASDFPN 118
            E +AG+ TVPA    +I R LPD + + +    +G  + V SGRS+FSL  LP +DFP+
Sbjct: 61  VE-QAGATTVPAHLLYEIVRKLPDGSEVLLATNPDGSSMTVASGRSKFSLQCLPEADFPD 119

Query: 119 IEDWQSEVQVSLTQAELRGLIEKTQFSMANQDVRYYLNGMLF---EIDGTT-LRSVATDG 174
           +          L  A+L+ LI++TQF+++ ++ RYYLNG+ F   E +G   LR+VATDG
Sbjct: 120 LTAGTFSHTFKLKAADLKMLIDRTQFAISTEETRYYLNGIFFHTIESNGELKLRAVATDG 179

Query: 175 HRMAVAQ--AQLGADFAQKQIIVPRKGVLELVKLLDAPEQPVVLQIGHSNLRAEVNHFVF 232
           HR+A A   A  G++     II+PRK V EL KL+D PE  V +++  + +R  +   V 
Sbjct: 180 HRLARADVDAPSGSE-GMPGIIIPRKTVGELQKLMDNPELEVTVEVSDAKIRLAIGSVVL 238

Query: 233 TSKLVDGRFPDYRRVLPQHTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRI 292
           TSKL+DG FPDY+RV+P    K ++  C+   +A  R + +S+E+ R V++ L D  + +
Sbjct: 239 TSKLIDGTFPDYQRVIPTGNDKEMRVDCQTFARAVDRVSTISSERGRAVKLALTDGQLTL 298

Query: 293 TANNPEQEEAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVENV 352
           T NNP+   A E + V ++ + +EIGFN  Y+LD+ + L  ++    ++DA +  LV + 
Sbjct: 299 TVNNPDSGSATEEVAVGYDNDSMEIGFNAKYLLDITSQLSGEDAIFLLADAGSPTLVRDT 358

Query: 353 DDDSAMYVVMPIRL 366
             D A+YV+MP+R+
Sbjct: 359 AGDDALYVLMPMRV 372