Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., chromosomal replication initiation protein from Pseudomonas simiae WCS417

 Score =  616 bits (1589), Expect = 0.0
 Identities = 319/505 (63%), Positives = 380/505 (75%), Gaps = 38/505 (7%)

Query: 1   MSSSLWLQCLQRLQEELPAAEFSMWVRPLQAELNDNTLTLFAPNRFVLDWVRDKYLNNIN 60
           MS  LW QC++ L+EELPA +F+ W+RPLQ E   + L ++APNRFVLDWV +KYL+ + 
Sbjct: 1   MSVELWQQCVELLREELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRVL 60

Query: 61  RLLMEFSGNDVPNLRFEVGSRPVVAPKPAP---VRTAADVAAESSAPAQLA--------- 108
            LL E      P L   +GS+   AP+ AP   +  AA  A  ++APA  A         
Sbjct: 61  ELLDEHGNGLAPVLSLLIGSKRSSAPRAAPNAPLAAAASQAQAAAAPAVSAPSPAPAPSK 120

Query: 109 ---------QRKPIHKTWDDDSAAAD-----------------ITHRSNVNPKHKFNNFV 142
                      +P   ++D  + AA                  + H S +N    F NFV
Sbjct: 121 SSAQKNAPENEEPSRDSFDPMAGAASQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFV 180

Query: 143 EGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAKVVYMH 202
           EGKSNQL  AAA QV+DNP   YNPLFLYGG GLGKTHL+HAVGN ++  NPNAKVVY+H
Sbjct: 181 EGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLH 240

Query: 203 SERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQ 262
           SERFV DMVKALQ NAI EFKR+YRSVDALLIDDIQFFA KERSQEEFFHTFNALLEG Q
Sbjct: 241 SERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQ 300

Query: 263 QIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHLPDEVA 322
           Q+ILTSDRYPKEI G+E+RLKSRFGWGLTVA+EPPELETRVAILMKKA+  ++ LP + A
Sbjct: 301 QVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAA 360

Query: 323 FFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKT 382
           FFIA+R+RSNVRELEGAL RVIA+++F GR ITI+ +RE+L+DLLALQ+KLV++DNIQ+T
Sbjct: 361 FFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRT 420

Query: 383 VAEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACR 442
           VAEYYKIK++DLLSKRRSRSVARPRQ+AMAL+KELTNHSLPEIGD FGGRDHTTVLHACR
Sbjct: 421 VAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACR 480

Query: 443 KIEQLREESHDIKEDYSNLIRTLSS 467
           KI +L+E   DI+EDY NL+RTL++
Sbjct: 481 KINELKESDADIREDYKNLLRTLTT 505