Pairwise Alignments

Query, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., chromosomal replication initiator protein from Pseudomonas putida KT2440

 Score =  609 bits (1570), Expect = e-179
 Identities = 320/506 (63%), Positives = 381/506 (75%), Gaps = 39/506 (7%)

Query: 1   MSSSLWLQCLQRLQEELPAAEFSMWVRPLQAELNDNTLTLFAPNRFVLDWVRDKYLNNIN 60
           MS  LW QC++ L++ELPA +F+ W+RPLQ E   + L ++APNRFVLDWV +KYL  + 
Sbjct: 1   MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRLL 60

Query: 61  RLLMEFSGNDVPNLRFEVGSRPVVAPKPAP------------VRTAADVAAESSA--PAQ 106
            LL E      P L   +GSR   AP+ AP             +T A   A ++A  P  
Sbjct: 61  ELLGENGSGIAPALSLLIGSRRSSAPRAAPNAPVSAAVAASLAQTQAHKTAPAAAVEPVA 120

Query: 107 LAQRKPIH-KTWDDDS-------AAAD-----------------ITHRSNVNPKHKFNNF 141
           +A  +P+  +T   DS       AAA                  + H S +N    F+ F
Sbjct: 121 VAAAEPVLVETSSRDSFDAMAEPAAAPPSGGGRAEQRTVQVEGALKHTSYLNRTFTFDTF 180

Query: 142 VEGKSNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPNAKVVYM 201
           VEGKSNQL  AAA QV+DNP   YNPLFLYGG GLGKTHL+HAVGN ++  NPNAKVVY+
Sbjct: 181 VEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYL 240

Query: 202 HSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGN 261
           HSERFV DMVKALQ NAI EFKR+YRSVDALLIDDIQFFA KERSQEEFFHTFNALLEG 
Sbjct: 241 HSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGG 300

Query: 262 QQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKAEDHQIHLPDEV 321
           QQ+ILTSDRYPKEI G+E+RLKSRFGWGLTVA+EPPELETRVAILMKKA+  ++ LP + 
Sbjct: 301 QQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDA 360

Query: 322 AFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQK 381
           AFFIA+R+RSNVRELEGAL RVIA+++F GR ITI+ +RE+L+DLLALQ+KLV++DNIQ+
Sbjct: 361 AFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQR 420

Query: 382 TVAEYYKIKVADLLSKRRSRSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHAC 441
           TVAEYYKIK++DLLSKRRSRSVARPRQ+AMAL+KELTNHSLPEIGD FGGRDHTTVLHAC
Sbjct: 421 TVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDMFGGRDHTTVLHAC 480

Query: 442 RKIEQLREESHDIKEDYSNLIRTLSS 467
           RKI +L+E   DI+EDY NL+RTL++
Sbjct: 481 RKINELKESDADIREDYKNLLRTLTT 506