Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 93.6 bits (231), Expect = 3e-24
 Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 7/223 (3%)

Query: 25  VKVGMSGRYFPFTFVKQDELQGFEVDVWNEIGKRNDYKVEFVTANFSGLLGLLETGRIDT 84
           ++V     + P  FV+  +  GF+V++   IGK    K+E++  +F GL+  L + R D 
Sbjct: 31  LRVATDATFPPMEFVENGKRTGFDVELVEAIGKTLGRKIEWIDIDFKGLVPGLISKRFDM 90

Query: 85  ISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGIDDLAGKTVAVNLGSNFEQLL 144
             + I ITD RK    F+ PY   G  + V+ GN AIK   D+ GK V+V +G+  + + 
Sbjct: 91  AVSGIYITDERKKVVDFTVPYYAGGLVVMVKDGNTAIKTPADINGKKVSVQVGT--KSVS 148

Query: 145 RNHDKDGKINIKTYDTGIE--HDVALGRADAFVMDRLSALELIEKTGLPLQLAGSPFETI 202
              +K  ++ +   +   E  + V +GRADA V  + +A + +   G    L   P +  
Sbjct: 149 YTKEKFPQVQLMEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRG---GLKVLPEQIT 205

Query: 203 ENAWPFVNNEKGQQLQGEVNKALAAMRADGTLSQIALKWFGTD 245
              +     +   +L   VN A+  ++ADGT  QI  KWF  +
Sbjct: 206 TEEYGMAIRKDTPELTKAVNGAIEKLKADGTYDQIVKKWFSAN 248