Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 97.4 bits (241), Expect = 2e-25
 Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 4/241 (1%)

Query: 7   IALAALALSSATVQAATEVKVGMSGRYFPFTFVKQDELQGFEVDVWNEIGKRNDYKVEFV 66
           +   A A     +QA+ ++ V   G + PF + +  +L GFE+++   + K+    +E+ 
Sbjct: 16  VIFTASARPFPDIQASGKLVVATGGEFPPFNYFEGKKLTGFEIEIAEIVVKKMGLAIEWK 75

Query: 67  TANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGIDD 126
           T  F  LL  L+  R D + +   IT  R     F+ P+   G+ I  R  + AI+G  D
Sbjct: 76  TIGFDSLLAGLQQDRWDIVVSSHGITPERAKAVDFASPHYCSGSSIVSR--DPAIRGAAD 133

Query: 127 LAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYDTGIEHDVALGRADAFVMDRLSALELIE 186
           L GK V V  GS + + +R   K  +I     D  +   +A GR DA+V D+  AL  ++
Sbjct: 134 LTGKVVGVQTGSTYLENVRKLTKPKEIKNFPQDRDVRTALATGRVDAWVTDKFVALAAVK 193

Query: 187 KTGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAMRADGTLSQIALKWFGTDI 246
                    G P   +E     V  +    L    +KALA   ADG+ + ++ ++FG D+
Sbjct: 194 SNPQANLKLGDPL-FVERIAAAV-GKGNTALAAAYDKALAEALADGSYAAVSNRYFGEDV 251

Query: 247 S 247
           S
Sbjct: 252 S 252