Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 93.2 bits (230), Expect = 5e-24
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 9/243 (3%)

Query: 7   IALAALALSSATVQAATEVKVGMSGRYFPFTFVKQD-ELQGFEVDVWNEIGKRNDYKVEF 65
           +A AA     A  Q   E+ V  S  Y PF F  +D ++ GF++D+ N I K+   K++ 
Sbjct: 13  VATAATFALGAQAQNR-ELTVASSATYAPFAFENKDKQIVGFDIDIINAIAKQQGLKIKI 71

Query: 66  VTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGID 125
           V   F+G+ G L  G +D + + +TI D RK  Y F+ PY      I + K N  +  + 
Sbjct: 72  VNTPFTGIFGALNNGDVDLVISGVTINDKRKQSYDFTPPYFAARQLIALPK-NSKVTSLK 130

Query: 126 DLAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYDTG--IEHDVALGRADAFVMDR-LSAL 182
           DLAGK +AV   S  + +          +I+ +++   I  ++A G  DA + D  + A 
Sbjct: 131 DLAGKKIAVVSASTADDIASREFGKTSPDIRRFESTPLIISELAGGGVDAAMGDNGVIAY 190

Query: 183 ELIEKTGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAMRADGTLSQIALKWF 242
            + +   L   +    F   E  +  V  +  + L  ++   LAA+RADG+   I  KWF
Sbjct: 191 RVAQNPDLK-TIDDKSFP--EEGFGIVVKKGDKALLDKLTAGLAAIRADGSYVTIYKKWF 247

Query: 243 GTD 245
             D
Sbjct: 248 NKD 250