Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., glutamine ABC transporter substrate-binding protein GlnH from Pectobacterium carotovorum WPP14

 Score =  109 bits (272), Expect = 6e-29
 Identities = 85/257 (33%), Positives = 126/257 (49%), Gaps = 23/257 (8%)

Query: 1   MKHWFNIALAALAL--SSATVQAATEVKVGMSGRYFPFTFVKQDELQGFEVDVWNEIGKR 58
           MK     +LAAL L  S ++  A  E+ V     + PF F + D+  GF++D+W+ I K+
Sbjct: 1   MKSLLKASLAALTLMMSVSSYAAEKELIVATDTAFVPFEFKQGDKYVGFDIDLWDAIAKQ 60

Query: 59  NDYKVEFVTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGN 118
            + K      +F G++  L+T  ID     ITIT+ RK    FSD Y   G  + V+  N
Sbjct: 61  LNLKYTLKPMDFGGIIPALQTRNIDLALAGITITEERKKAIDFSDGYYNSGLLVMVKADN 120

Query: 119 EAIKGIDDLAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYD----TGIEH---DVALGRA 171
             IKG  DLAGK +AV  G+             K NIKT D      I++   ++   RA
Sbjct: 121 NDIKGEQDLAGKVLAVKSGTGSVDY-------AKANIKTKDLRQFPNIDNAYMELGTNRA 173

Query: 172 DAFVMDRLSALELIEKTGL-PLQLAGSPFETIEN--AWPFVNNEKGQQLQGEVNKALAAM 228
           DA + D  + L  I+  G    +  G   +  +   A+P  +NE    L+ +VN AL  +
Sbjct: 174 DAVLHDTPNILYFIKTAGNGQFKAVGDSIKAQQYGIAFPKGSNE----LREKVNGALKTL 229

Query: 229 RADGTLSQIALKWFGTD 245
           R +GT ++I  KWFG +
Sbjct: 230 RENGTYAEIYKKWFGVE 246