Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  113 bits (282), Expect = 4e-30
 Identities = 85/255 (33%), Positives = 120/255 (47%), Gaps = 19/255 (7%)

Query: 1   MKHWFNIALAALALSSATVQAATEVK--VGMSGRYFPFTFVKQDELQGFEVDVWNEIGKR 58
           MK    ++LAAL L+ A    A + K  V     + PF F + D+  GF+VD+W+ I K 
Sbjct: 1   MKSLLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWDAIAKE 60

Query: 59  NDYKVEFVTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGN 118
                     +FSG++  L+T  ID     ITITD RK    FSD Y   G  + V+  N
Sbjct: 61  LKLDYTLKPMDFSGIIPALQTKNIDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANN 120

Query: 119 EAIKGIDDLAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYD----TGIEH---DVALGRA 171
             IK + DL GK VAV  G+             K NIKT D      I++   ++   RA
Sbjct: 121 NDIKSVKDLDGKVVAVKSGTGSVDY-------AKANIKTKDLRQFPNIDNAYMELGTNRA 173

Query: 172 DAFVMDRLSALELIEKTGL-PLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAMRA 230
           DA + D  + L  I+  G    +  G   E  +    F       +L+ +VN AL  +R 
Sbjct: 174 DAVLHDTPNILYFIKTAGNGQFKAVGESLEAQQYGVAFPKG--SDELREKVNGALKTLRE 231

Query: 231 DGTLSQIALKWFGTD 245
           +GT ++I  KWFGT+
Sbjct: 232 NGTYNEIYKKWFGTE 246