Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine/arginine/ornithine transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 9/247 (3%)

Query: 9   LAALALSSATVQAATE-VKVGMSGRYFPFTFVK-QDELQGFEVDVWNEIGKRNDYKVEFV 66
           L  L+ ++++  A  E V++G    Y PF+    + +  GF++D+ NE+ KR   K  +V
Sbjct: 11  LVGLSTAASSYAALPETVRIGTDTTYAPFSSKDAKGDFVGFDIDLGNEMCKRMQVKCTWV 70

Query: 67  TANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGIDD 126
            ++F  L+  L+  +ID I + ++ITD R+ +  FSD      +++   KG+     +D 
Sbjct: 71  ASDFDALIPSLKAKKIDAIISSLSITDKRQQEIAFSDKLYAADSRLIAAKGSPIQPTLDS 130

Query: 127 LAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYDTG--IEHDVALGRADAFVMDRLSALE- 183
           L GK V V  GS  E       +   +++  Y     +  D+A GR DA + D ++A E 
Sbjct: 131 LKGKHVGVLQGSTQEAYANETWRSKGVDVVAYANQDLVYSDLAAGRLDAALQDEVAASEG 190

Query: 184 -LIEKTGLPLQLAGSPFET---IENAWPFVNNEKGQQLQGEVNKALAAMRADGTLSQIAL 239
            L +  G     AGS  +      +       +   +L    NKAL  +R DGT  ++A 
Sbjct: 191 FLKQPAGKDFAFAGSSVKDKKYFGDGTGVGLRKDDAELTAAFNKALGELRQDGTYDKMAK 250

Query: 240 KWFGTDI 246
           K+F  ++
Sbjct: 251 KYFDFNV 257