Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., lysine-arginine-ornithine-binding periplasmic protein from Enterobacter asburiae PDN3

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 26/256 (10%)

Query: 7   IALAALALSSATVQAATEVKVGMSGRYFPFTFVK-QDELQGFEVDVWNEIGKRNDYKVEF 65
           + L+A A S A +     V++G    Y PF+    + +  GF++D+ NE+ KR   K  +
Sbjct: 12  VGLSAAAGSYAALPQT--VRIGTDATYAPFSSKDAKGDFVGFDIDLGNEMCKRIAVKCTW 69

Query: 66  VTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIKGID 125
           V ++F  L+  L+  +ID I + ++IT+ R+ +  FSD      +++   KG+     ID
Sbjct: 70  VGSDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFSDKLYAADSRLIAPKGSPIKPTID 129

Query: 126 DLAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYDTG--IEHDVALGRADAFVMDRLSALE 183
            L GK V V  GS  E       ++  +++  Y     I  D+A GR DA   D ++A E
Sbjct: 130 SLKGKHVGVLQGSTQEGYANATWREKGVDVVAYQNQDLIYSDLAAGRLDAAFQDEVAASE 189

Query: 184 LIEKTGLPLQLAGSPFETIENAWPFVNNEK-------------GQQLQGEVNKALAAMRA 230
                G   Q AG  +     A P V ++K               +L+   +KA A +R 
Sbjct: 190 -----GFLKQPAGKDYAF---AGPSVKDKKYFGDGTGIGLRKDDTELKAAFDKAFAELRK 241

Query: 231 DGTLSQIALKWFGTDI 246
           DGT  ++A K+F  ++
Sbjct: 242 DGTYDKLAKKYFDFNV 257