Pairwise Alignments

Query, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., glutamine ABC transporter substrate-binding protein GlnH from Escherichia coli ECRC62

 Score =  113 bits (283), Expect = 3e-30
 Identities = 84/255 (32%), Positives = 120/255 (47%), Gaps = 19/255 (7%)

Query: 1   MKHWFNIALAALALSSATVQAATEVK--VGMSGRYFPFTFVKQDELQGFEVDVWNEIGKR 58
           MK    ++LAAL L+ A    A + K  V     + PF F + D+  GF+VD+W  I K 
Sbjct: 1   MKSVLKVSLAALTLAFAVSSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKE 60

Query: 59  NDYKVEFVTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGN 118
                E    +FSG++  L+T  +D     ITITD RK    FSD Y   G  + V+  N
Sbjct: 61  LKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANN 120

Query: 119 EAIKGIDDLAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYD----TGIEH---DVALGRA 171
             +K + DL GK VAV  G+             K NIKT D      I++   ++   RA
Sbjct: 121 NDVKSVKDLDGKVVAVKSGTGSVDY-------AKANIKTKDLRQFPNIDNAYMELGTNRA 173

Query: 172 DAFVMDRLSALELIEKTGL-PLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAMRA 230
           DA + D  + L  I+  G    +  G   E  +    F       +L+ +VN AL  +R 
Sbjct: 174 DAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKG--SDELRDKVNGALKTLRE 231

Query: 231 DGTLSQIALKWFGTD 245
           +GT ++I  KWFGT+
Sbjct: 232 NGTYNEIYKKWFGTE 246