Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  125 bits (313), Expect = 1e-33
 Identities = 76/216 (35%), Positives = 125/216 (57%), Gaps = 16/216 (7%)

Query: 19  LGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGL 78
           L  T+ M+   +   +++ +  A +R+   P+L  ++  Y   FRGTPL++QL LL++ L
Sbjct: 76  LVNTIIMSVLAMALGVVIGVITAIMRMSANPILRYVAITYTWLFRGTPLILQL-LLWFNL 134

Query: 79  PQVFPL-----LVGLDA------FSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLS 127
             +FP+     L  +D       F AA++GL+++  AY AE +RA ++ +D  Q EA+ S
Sbjct: 135 ALIFPVIAIPGLFSIDTVDLMTPFVAALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKS 194

Query: 128 VGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFR 187
           +GM + QA+RR+ILPQA RV +P + N FI M+K TSLA  +  +E++  AQ    ++ R
Sbjct: 195 IGMPSLQALRRVILPQAMRVIIPPVGNEFISMVKMTSLASVIQYSELLHNAQNIYYANAR 254

Query: 188 FFEAFLAVALIYWVVVLVLTRLQSWAEQKLNKAYAR 223
             E  +   + Y  VV VL    S+ + +L + +AR
Sbjct: 255 VMELLIVAGIWYLAVVTVL----SFGQSRLERRFAR 286