Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  125 bits (313), Expect = 8e-34
 Identities = 68/202 (33%), Positives = 118/202 (58%), Gaps = 2/202 (0%)

Query: 15  LLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLL 74
           LL   G T+ +    ++ A+ L + LA +R+     L   SQ+++ FFR  PL++ ++  
Sbjct: 15  LLHGAGLTVLLTVLTMLVAVPLGIVLALMRLSSSKALSGASQVFVEFFRNLPLILVVYWA 74

Query: 75  YYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQ 134
           +Y +P +  + +   AF+  ++ L L+ +AY AE+ RA I  I + QMEA++++GM+  Q
Sbjct: 75  FYVMPVL--MHIEFSAFTTGLVALCLNVSAYNAETFRAGINSIRKGQMEAAIAMGMSRWQ 132

Query: 135 AMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLA 194
           AM+++++PQA R  LP L + ++ + K TSL   + V E+   A    SSSFR  E   A
Sbjct: 133 AMKKVVIPQAWRRVLPVLASTWVSLFKDTSLVSVIAVGELAHVALQIRSSSFRVLEMLTA 192

Query: 195 VALIYWVVVLVLTRLQSWAEQK 216
           +A+IYW++     +L  W ++K
Sbjct: 193 MAVIYWLMGYPQAKLVDWIQKK 214