Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  121 bits (303), Expect = 2e-32
 Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 4/199 (2%)

Query: 19  LGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGL 78
           L TTL ++       L++ LF    R+   P L  LS +Y+   RGTPLLVQ+F+ Y+ +
Sbjct: 122 LWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFFI 181

Query: 79  PQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRR 138
             V    + L    A V  L L   AY+AE +RA +  I + Q EA+ S+G+   Q+MR 
Sbjct: 182 GTV----LNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRH 237

Query: 139 IILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALI 198
           +ILPQA +  LP L   FI ++K TSL   + + E+    +   ++SF  FE +  VA +
Sbjct: 238 VILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGL 297

Query: 199 YWVVVLVLTRLQSWAEQKL 217
           Y ++ L L+ + S  E++L
Sbjct: 298 YLLINLPLSHIASRLERRL 316