Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  157 bits (398), Expect = 1e-43
 Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 3/202 (1%)

Query: 22  TLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRGTPLLVQLFLLYYGLPQV 81
           TL +    +V +++L    A  R+    VL  ++  Y SFFRGTPLL+Q+ L+Y GLPQV
Sbjct: 75  TLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQILLIYLGLPQV 134

Query: 82  FPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEASLSVGMTTSQAMRRIIL 141
             L+ G  A SA +I L+L++ AY++E  RA I+G+ R Q EA+L++GM T Q    IIL
Sbjct: 135 -GLVPG--AISAGIIALSLNYGAYLSEIFRAGILGVARGQREAALALGMRTPQIFCHIIL 191

Query: 142 PQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASSSFRFFEAFLAVALIYWV 201
           PQA RV +P   N FI M+K +SL   +GV E+M  AQ    SS+R+ E     A+IYWV
Sbjct: 192 PQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRYLEMLTTAAVIYWV 251

Query: 202 VVLVLTRLQSWAEQKLNKAYAR 223
           + ++L  LQ+  E+   KAY R
Sbjct: 252 LSILLELLQARLERHFGKAYQR 273