Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., L-cystine transport system permease protein YecS from Pseudomonas sp. DMC3

 Score =  186 bits (471), Expect = 4e-52
 Identities = 100/215 (46%), Positives = 144/215 (66%), Gaps = 3/215 (1%)

Query: 5   FHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFRG 64
           F   L+  P LLK    T+ ++  G+ F L+L   LA +R+ +   +  L+++Y+SFFRG
Sbjct: 5   FQLALDSAPFLLKGAYYTVVLSLGGMFFGLLLGFGLALMRLSRFKSVSWLARIYVSFFRG 64

Query: 65  TPLLVQLFLLYYGLPQVFPLLVGLDAFSAAVIGLTLHFAAYMAESIRAAIIGIDRSQMEA 124
           TPLLVQLF++YYGLPQ   L + LD   AA+IG +L+ AAY  E +RAAI  I+R Q EA
Sbjct: 65  TPLLVQLFVIYYGLPQ---LGMELDPLPAALIGFSLNMAAYACEILRAAIGSIERGQWEA 121

Query: 125 SLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMAKAQMEASS 184
           + S+GMT +Q +RR ILPQA R ALP L N FI ++K T+LA T+ V E+  +AQ+  + 
Sbjct: 122 AASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLITAR 181

Query: 185 SFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLNK 219
           +F  F  +LA ALIYW++  VL+ LQ+  E+++N+
Sbjct: 182 TFEVFTMYLAAALIYWILATVLSHLQNKLEERVNR 216