Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

 Score =  127 bits (320), Expect = 1e-34
 Identities = 81/222 (36%), Positives = 126/222 (56%), Gaps = 7/222 (3%)

Query: 4   DFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFR 63
           D   ++E  P LL  + TTL +A   L+   ++++ +A +R+ K  ++  L+  Y+   R
Sbjct: 2   DIQLIIESFPKLLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIR 61

Query: 64  GTPLLVQLFLLYYGLPQVFPLL--VGL-----DAFSAAVIGLTLHFAAYMAESIRAAIIG 116
            TPLLVQ+FL+YYG  Q   +L  VGL     + +  A++ L L+ AAY +E IR  I  
Sbjct: 62  STPLLVQMFLIYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQS 121

Query: 117 IDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAEIMA 176
           +   Q+EA+ +VGM+T    RRI+ P A R ALP+  N  + +IKSTSLA T+ + E+  
Sbjct: 122 VSLGQIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTG 181

Query: 177 KAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKLN 218
            A+   S+++   E F+    IY  +  V++RL   AE  LN
Sbjct: 182 LAKQIISATYSPVEVFIVAGAIYLFITFVVSRLVMLAEWWLN 223