Pairwise Alignments

Query, 223 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  128 bits (321), Expect = 1e-34
 Identities = 72/224 (32%), Positives = 123/224 (54%), Gaps = 10/224 (4%)

Query: 4   DFHYMLELLPILLKYLGTTLEMASWGLVFALILALFLANIRVFKVPVLDPLSQLYISFFR 63
           DF ++ +  P+LL     TL +    +    +LA+ LA  +V    V   L++ Y +FFR
Sbjct: 2   DFSWVAKYWPLLLSGAWQTLALLVISVSIGFVLAIGLAFAQVSGGRVTKILARAYCTFFR 61

Query: 64  GTPLLVQLFLLYYGLPQVFPLLVGL----------DAFSAAVIGLTLHFAAYMAESIRAA 113
           GTPLL+QL+LLYYG+    P++ GL          + F  A +  TL++AAY AE +R A
Sbjct: 62  GTPLLIQLWLLYYGVGSFLPMIPGLRQSFMWPVLREGFFFAAVSFTLNYAAYEAEVLRGA 121

Query: 114 IIGIDRSQMEASLSVGMTTSQAMRRIILPQATRVALPSLMNYFIDMIKSTSLAFTLGVAE 173
           ++ + + ++EA  + GM     +RRI LP+A R+ALP++    +  +K+T LAFT+ V +
Sbjct: 122 LLAVPKGELEAGRAFGMGRFTLIRRIWLPRAIRIALPTITGEVVMQLKATPLAFTVTVMD 181

Query: 174 IMAKAQMEASSSFRFFEAFLAVALIYWVVVLVLTRLQSWAEQKL 217
           + A A      +   +E  + V + Y ++  ++ R     E+++
Sbjct: 182 LYAVAYKVRQDTLLVYEPLIVVTVFYLILTAIIARCFGLVERQV 225