Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., membrane protein insertase from Pseudomonas simiae WCS417

 Score =  456 bits (1172), Expect = e-132
 Identities = 241/556 (43%), Positives = 339/556 (60%), Gaps = 26/556 (4%)

Query: 1   MDSQRNILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPA--------------- 45
           MD +R IL++ALA+VS+++  +W      A   TQ   +  AAPA               
Sbjct: 1   MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASAD 60

Query: 46  -PSFSDELDPTPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPE-SF 103
            PS + E        V      I V TDVL L+ID  GGD+   KL  Y    + P+  F
Sbjct: 61  VPSANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPF 120

Query: 104 VLLQNTQGHQFIAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGI 163
            L  N     ++AQSGL G  G D  +  RP Y     ++ LA+GQ++L + + +  +G+
Sbjct: 121 QLFDNGGERTYLAQSGLTGTNGPDARATGRPVYSTEQKTYQLADGQNQLNVDLKFSLDGV 180

Query: 164 DYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLD---SGGNLAMPTYRGGA 220
           +Y K F   RG Y + V + + N      +  ++A L+++      S       TY G A
Sbjct: 181 NYIKRFSFTRGLYDLKVTYLIDNEGDKPWSGNLFAQLKRDASSDPSSSTATGTATYLGAA 240

Query: 221 YSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINN 280
             TS   YKK S  D+   +L     V   WVA +QHYF +AWIP  + +A L     ++
Sbjct: 241 LWTSSEPYKKVSMKDIDKGSLK--ETVQGGWVAWLQHYFVTAWIP-SKGEANLVQTRKDS 297

Query: 281 LGD--MGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPL 338
            G+  +G   P  T+A G KAE  ATL+ GPK Q  +   +P L+L VDYG+LWFIA+P+
Sbjct: 298 QGNYIIGFTGPALTVAPGAKAETSATLYAGPKSQAVLKELSPGLELTVDYGFLWFIAQPI 357

Query: 339 HWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD 398
            WLL  I + VGNWG +II LT +++G  +PL+ A Y SMA+MR + PKL A++E+ GDD
Sbjct: 358 FWLLQHIHSIVGNWGFSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQHGDD 417

Query: 399 RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSA 458
           RQ+MSQ MMELYKKEK+NPLGGCLPIL+QMP+F++LYW L+ESVE+R +PF  WI DLS 
Sbjct: 418 RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSI 477

Query: 459 QDPYYILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVS 518
           +DP++ILP++MGA+MF+ Q+++PT   DPMQ K+M  MP++FTFFFLWFP+GLVLYW+V+
Sbjct: 478 KDPFFILPIIMGATMFIQQRLNPTP-PDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVN 536

Query: 519 NIVTLIQQTLIYKALE 534
           N++++ QQ  I + +E
Sbjct: 537 NVLSISQQWYITRKIE 552