Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., Inner membrane protein translocase and chaperone YidC, long form from Sphingobium sp. HT1-2

 Score =  225 bits (573), Expect = 4e-63
 Identities = 171/574 (29%), Positives = 269/574 (46%), Gaps = 61/574 (10%)

Query: 1   MDSQRNILLIALALVSFL-----LFQQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPT 55
           +D ++NI+L  L   + L     + + +  A NP     +  ++T   PA     +   T
Sbjct: 1   VDDKKNIILAVLLTAAILFGWPYISEHFFPAANPPATKIEGGKTTPLTPAGEAPAQDAST 60

Query: 56  PAQNVAAKAKT---ITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQGH 112
             ++ A   K    + + T  +  SI+  G  +    L  Y E +      + L +  G 
Sbjct: 61  AIRDRALVLKETPRVAIRTPKIIGSINLKGARIDDIVLPTYKETIAKDSPAIRLYSPSGT 120

Query: 113 QFIAQSGLVGPQGIDV-TSNNRPAYQVSADSFTLAEGQDELRIPMTYQAN---GIDYTKT 168
           +    +G  G QG  + T +    +  S    T          P+T   N   G ++   
Sbjct: 121 KDAYFAGF-GWQGEGIKTPDANTVWTASGTELTPTS-------PVTLSWNNGAGQNFEIR 172

Query: 169 FILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNL------AMPTYRGGAYS 222
           + +   +Y +     V+N+      +  Y ++ +    +  +        M  + G A  
Sbjct: 173 YSIDE-NYMISAAQKVSNSGTGAIAVKSYGYVSRAAPSADPDTWTIHVGPMGVFNGAA-- 229

Query: 223 TSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIP--RDEPQAQLYSRVINN 280
             DV YK     D++    S     T  W+     Y+ SA IP  +D    Q+       
Sbjct: 230 NYDVNYK-----DLEKGPASQSFQSTGGWIGFTDKYWLSALIPDQKDAFTGQMRKGAGTQ 284

Query: 281 LGDMGIRTPNKTIANGDKAEFEATLWVGPK----LQDQMAATAPNLDLVVDYGWLWFIAK 336
                I      +A G        L+VG K    LQ    A  P  D  +D+GW ++  +
Sbjct: 285 F-QTDIALAPVMLAPGKAMTQTNRLFVGAKEVKTLQAYERAGVPLFDRAIDWGWFYWFEQ 343

Query: 337 PLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIG 396
           P+  LL  +   +GN+GVAIICLTF VR  M+P+ + Q+ SMA MR +QPK++A++E+  
Sbjct: 344 PIFALLHWLFETLGNFGVAIICLTFCVRALMFPVAQRQFASMAAMRAVQPKMKALQEKYK 403

Query: 397 DDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDL 456
           DD+Q++ Q+MMELYK+EKVNPL GCLPI +Q+PIF ALY  L  ++E+RH PF  WI DL
Sbjct: 404 DDKQQLQQKMMELYKQEKVNPLAGCLPIFIQIPIFFALYKVLQLTIEMRHQPFVLWIKDL 463

Query: 457 SAQDPYYI-------------------LPLLMGASMFVIQKMSPTTITDPMQQKIMTFMP 497
           SA DP +I                   L LL+G SM++  K++P  + DPMQQ++   MP
Sbjct: 464 SAPDPLHILNLFGLLPFTPPSFLAIGVLALLLGISMWLQFKLNPAQM-DPMQQQVFAIMP 522

Query: 498 VMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYK 531
            M  F    F +GL++YW+ +N +++ QQ  +YK
Sbjct: 523 WMMMFIMAPFAAGLLVYWITNNCLSMAQQWWLYK 556