Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., probable membrane protein insertase from Pseudomonas putida KT2440

 Score =  459 bits (1181), Expect = e-133
 Identities = 241/556 (43%), Positives = 343/556 (61%), Gaps = 26/556 (4%)

Query: 1   MDSQRNILLIALALVSFLLFQQWQVAKNPAPQATQQAQSTGAAPA--------------- 45
           MD +R IL+ ALA+VS+++  +W      A   TQ   ++  AP                
Sbjct: 1   MDIKRTILIAALAVVSYVMVLKWNDDYGQAALPTQNTAASTVAPGLPDGVPAGNNGASAD 60

Query: 46  -PSFSDELDPTPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPE-SF 103
            PS + E  P     VA     I V TDVL L+ID +GGD+V   L +Y    + P   F
Sbjct: 61  VPSANAESSPAELAPVALSKDLIRVKTDVLELAIDPVGGDIVQLNLPKYPRRQDHPNIPF 120

Query: 104 VLLQNTQGHQFIAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPMTYQANGI 163
            L  N     ++AQSGL G  G D  ++ RP Y     S+ LA+GQ++L + + +  NG+
Sbjct: 121 QLFDNGGERVYLAQSGLTGTDGPDARASGRPLYAAEQKSYQLADGQEQLVVDLKFSDNGV 180

Query: 164 DYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLL---DSGGNLAMPTYRGGA 220
           +Y K F  KRG Y ++V + + N SG      M+A L+++      S       TY G A
Sbjct: 181 NYIKRFSFKRGEYDLNVSYLIDNQSGQAWNGNMFAQLKRDASGDPSSSTATGTATYLGAA 240

Query: 221 YSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINN 280
             T+   YKK S  D+   +L    +V+  WVA +QHYF +AWIP       + +R  ++
Sbjct: 241 LWTASEPYKKVSMKDIDKGSLK--ENVSGGWVAWLQHYFVTAWIPAKSDNNVVQTRK-DS 297

Query: 281 LGD--MGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPL 338
            G+  +G   P  ++  G K E  A L+ GPK+Q ++   +P L+L VDYG+LWFIA+P+
Sbjct: 298 QGNYIIGYTGPVISVPAGGKVETSALLYAGPKIQSKLKELSPGLELTVDYGFLWFIAQPI 357

Query: 339 HWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDD 398
            WLL  I + +GNWG +II LT +++G  +PL+ A Y SMA+MR + PKL A++ER GDD
Sbjct: 358 FWLLQHIHSLLGNWGWSIIVLTMLIKGLFFPLSAASYRSMARMRAVAPKLAALKERFGDD 417

Query: 399 RQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSA 458
           RQ+MSQ MMELYKKEK+NPLGGCLPIL+QMP+F+ALYW L+ESVE+R +P+  WI DLS 
Sbjct: 418 RQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYWVLLESVEMRQAPWILWITDLSI 477

Query: 459 QDPYYILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVS 518
           +DP++ILP++MGA+MF+ Q+++PT   DPMQ K+M  MP++FTFFFLWFP+GLVLYW+V+
Sbjct: 478 KDPFFILPIIMGATMFIQQRLNPTP-PDPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVN 536

Query: 519 NIVTLIQQTLIYKALE 534
           N +++ QQ  I + +E
Sbjct: 537 NCLSISQQWYITRRIE 552