Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., Inner membrane protein translocase component YidC, long form from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  358 bits (920), Expect = e-103
 Identities = 202/562 (35%), Positives = 317/562 (56%), Gaps = 39/562 (6%)

Query: 2   DSQRNILLIALALVSFLLFQQWQVAKN---------------PAPQATQQAQSTGAAPAP 46
           D +R+IL +   L   L++ +WQ+                  PA   +Q A ST A    
Sbjct: 3   DIRRSILWVVFGLSMVLIWDKWQIHNGHKPTFFPGSAPAVTAPAASTSQPAGSTSAGVPS 62

Query: 47  SFSDELDP---TPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPES- 102
           S      P   TPA    A A+   V+TD+  L  ++ GG ++ A+L +++E     +  
Sbjct: 63  STQATAAPGVETPAAAPGAVAQRHEVTTDLFKLVFNSEGGSLIGAELLKHAEATGQSKDK 122

Query: 103 ----FVLLQNTQGHQFIAQSGLVGPQGIDVTSNNRPAYQVSADSFTLAEGQDELRIPM-T 157
               F LL     H ++AQ+GL+G         ++    +  +  +LA+GQ+EL++   +
Sbjct: 123 TERPFTLLAQGGEHIYVAQTGLIGGN----FPTHKTPMTLVGNPTSLADGQNELQVRFES 178

Query: 158 YQANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPT-- 215
            +  G+   KT+   RG Y + V  +V N  G   T  +Y    Q L+  G  L+  T  
Sbjct: 179 AEVGGVKLIKTYTFTRGRYDIGVQHEVKNVGGQAVTPQLY----QQLVRDGSKLSSETPF 234

Query: 216 ---YRGGAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQ 272
              + G A  T++ +Y+K  F +++          +  +VAM+QHYFASAW+  +    +
Sbjct: 235 YSTFTGPAVYTNEKKYQKIEFANIEKDKAEFVKTASDGYVAMVQHYFASAWLLGEGVARE 294

Query: 273 LYSRVI-NNLGDMGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATAPNLDLVVDYGWL 331
            ++R I NNL  +G  T    I  G     ++ L++GP+ +  +   AP L+LV DYGWL
Sbjct: 295 NFARKIDNNLFAVGSITALTAIEPGQSQSQQSRLFLGPQEEKVLETIAPGLELVKDYGWL 354

Query: 332 WFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAM 391
             +AKPL+WLL  I  +V NWG AI+ L  +++ A Y L  + Y SMAKM+ + P++  M
Sbjct: 355 TILAKPLYWLLEKIHGYVANWGWAIVLLVVLIKAAFYWLNASAYRSMAKMKKINPRIMEM 414

Query: 392 RERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFG 451
           RER+  + Q+M QEMM++Y++EKVNPLGGC PIL+Q+P+FIALYW L+ SVE+R++P+  
Sbjct: 415 RERLKGNPQQMQQEMMKIYREEKVNPLGGCFPILIQIPVFIALYWVLLSSVEMRNAPWMA 474

Query: 452 WIHDLSAQDPYYILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGL 511
           WI DLS+ DPY+ILPL+M  +  +   ++P    DP+Q K+M  MP+MF+  F +FPSGL
Sbjct: 475 WITDLSSPDPYFILPLVMAVTTLIQTALNPLP-PDPLQAKLMWLMPLMFSVMFFFFPSGL 533

Query: 512 VLYWLVSNIVTLIQQTLIYKAL 533
           VLYW+ +N++T+ QQ +I +++
Sbjct: 534 VLYWITNNVLTIAQQAVINRSM 555