Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., membrane protein insertase YidC from Magnetospirillum magneticum AMB-1

 Score =  262 bits (669), Expect = 3e-74
 Identities = 186/598 (31%), Positives = 285/598 (47%), Gaps = 81/598 (13%)

Query: 1   MDSQRNILLIALALVSFLLFQQW--QVAKNPAPQATQQ------AQSTGAAPAPSFSDEL 52
           M+ QRN+ +     V+ L+  Q+    AK P  QA QQ      A +   AP P+ +   
Sbjct: 1   MNDQRNLFVAIAISVAILIGWQYFFPTAKPPVEQAAQQQSAEQKASAPATAPTPATASSP 60

Query: 53  DPTPAQNVAA-------------KAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEE--L 97
              P    AA             K++ I + T  +  SI   G  +    L +Y E    
Sbjct: 61  AQVPGSPAAAAAQPAATRADALGKSRRIAIQTPSMHGSIALTGARIDDITLVKYRETPAA 120

Query: 98  NSPESFVLLQNTQGHQFIAQSGLV---------GPQGIDVTSNNRPAYQVSADSFTLAEG 148
           +S E  ++        + A+ G V         GP  +     + P    S    T   G
Sbjct: 121 DSREIDLMSPAESPEPYWAEFGWVATEANVKVPGPDSVWQAQGSGPLTPASPLVLTWDNG 180

Query: 149 QDELRIPMTYQANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSG 208
           +            G+ + +T+ +   +Y   V   V N     A+L  YA L +    + 
Sbjct: 181 E------------GLRFVRTYTVDE-NYMFGVAQRVENYGTKPASLHPYALLART--GTP 225

Query: 209 GNLAMPTYRGGAYSTSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDE 268
               M     G     D   K+  +DD+K    S+ +  T  W  +   Y+ +A +P   
Sbjct: 226 HVAGMYILHEGPLGVFDGTLKEMKYDDLKKEG-SSRHKTTGGWAGITDKYWLTALVP--P 282

Query: 269 PQAQLYSRVINN-LGD-----MGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATAPNL 322
            + ++  R ++  LG+     +    P + I  G   E    L+ G K    +   A   
Sbjct: 283 AKTEITGRFVHQRLGNADRYQVDYLAPARMIEPGKSEEAGFHLFTGAKQVSLLDGYAEKF 342

Query: 323 -----DLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTS 377
                DL +D+GW +F+ KP  +LL ++ + +GN G+AI+ LT I++ AM+PL    Y +
Sbjct: 343 GIDRFDLAIDFGWFYFLTKPFFYLLQMLHSALGNMGLAILALTVILKLAMFPLANKSYVA 402

Query: 378 MAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWA 437
           M KM+ LQPK+Q ++ R  DD+ R+ QEMM LYK EKVNP+ GCLPI++Q+P+F ALY  
Sbjct: 403 MGKMKKLQPKVQELQARYADDKMRLQQEMMALYKTEKVNPVSGCLPIMVQIPVFFALYKV 462

Query: 438 LMESVELRHSPFFGWIHDLSAQDPYYIL-------------------PLLMGASMFVIQK 478
           L  ++E+RH+PF+GWI DLSAQDP  I                    PL+MG +MF+ QK
Sbjct: 463 LFVTIEMRHAPFYGWISDLSAQDPTNIFTLFGMIPWTPPSMFHLGVWPLIMGVTMFLQQK 522

Query: 479 MSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVTLIQQTLIYKALEKK 536
           ++P   TDP+Q K+M F+P++FTF    F SGLV+YW  SN ++++QQ +I K  E+K
Sbjct: 523 LNPQP-TDPVQAKMMQFLPIIFTFLLANFASGLVIYWAWSNTLSILQQWVIMKRAEEK 579