Pairwise Alignments

Query, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., preprotein translocase 60 kD membrane subunit from Agrobacterium fabrum C58

 Score =  255 bits (651), Expect = 4e-72
 Identities = 163/549 (29%), Positives = 272/549 (49%), Gaps = 54/549 (9%)

Query: 21  QQWQVAKNPAPQATQQAQSTGAAPAPSFSDELDPTPAQNVAAKAKTITVSTDVLTLSIDT 80
           QQ    + PAP A   A   GA PA S       T  + +A + + + + T+ +  SI+ 
Sbjct: 43  QQQTTQQQPAPGAAPGATVEGAPPASSTQAAATATREEAIA-RTQRVAIDTNAIAGSINL 101

Query: 81  LGGDVVSAKLNQYSEELNSPESFVLLQNTQGHQ--FIAQSGLVGPQGIDVTSNNRPAYQV 138
            G      +L  Y E ++     + L +    +  +  + G V  Q +         + +
Sbjct: 102 TGARFDDIRLKGYHETVDDSSPIITLFSPADTKDGYFTELGYVAAQEVGGVPGPTTVWTL 161

Query: 139 -SADSFTLAEGQDELRIPMTY-QANGIDYTKTFILKRGSYAVDVVFDVANNSGSEATLGM 196
            S D  T     +   + +TY  + G+ +++T  +    Y + +   V N   +  +   
Sbjct: 162 ASGDKLT-----ETTPVTLTYTNSKGVVFSRTVSIDE-HYMLSIADKVENPGQAAISFAT 215

Query: 197 YAHLRQNLLDSGGNLAMPT-------YRGGAYSTSDVRYKKYSFDDMKDRNLSAPNDVTV 249
           Y  + +N         +P        + G +     +  KKY   D+++  ++     T 
Sbjct: 216 YGRVTRN-----NKPVIPPVFVIHEGFLGVSGKDGSLTEKKYK--DVEEEPVTVAK-ATG 267

Query: 250 NWVAMIQHYFASAWIP-RDEPQAQLYSRVINNLGDM--GIRTPNKTIANGDKAEFEATLW 306
            W+ +   Y+A+A +P +  P    YS +  N        ++ + T+  G   E ++ ++
Sbjct: 268 GWLGITDKYWAAAIVPPQTTPFETRYSHITGNQPSYQADFKSDSMTVEAGQSIELKSLVF 327

Query: 307 VGPK---LQDQMAA--TAPNLDLVVDYGWLWFIAKPLHWLLSVIQTFVGNWGVAIICLTF 361
            G K   L D+     + P  DL++D+GW +FI KP+  ++     + GN+GVAI+  T 
Sbjct: 328 AGAKEVPLVDRYETEYSVPKFDLLIDWGWFYFITKPMFKMMDFFFRYFGNFGVAILLTTI 387

Query: 362 IVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRMSQEMMELYKKEKVNPLGGC 421
           +V+   +PL   QY SMA M+ +QPK++ ++ + GDDR  M Q MM+LYK+EK+NP+ GC
Sbjct: 388 VVKALFFPLASKQYASMANMKRMQPKMEELKAKHGDDRMAMQQAMMQLYKEEKINPVAGC 447

Query: 422 LPILLQMPIFIALYWALMESVELRHSPFFGWIHDLSAQDPYYIL---------------- 465
            P+LLQ+P+F ALY  +  ++E+RH+PFFGWIHDLSA DP  +                 
Sbjct: 448 WPMLLQIPVFFALYKVIYVTIEMRHAPFFGWIHDLSAPDPTSLFNLFGLLPYDVPHFLMI 507

Query: 466 ---PLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLYWLVSNIVT 522
              PL+MG +MF+  +M+PT   DP Q  I T+MP++FTF    FP+GLV+YW  +N ++
Sbjct: 508 GVWPLVMGITMFLQMRMNPTP-PDPTQAMIFTWMPLIFTFMLASFPAGLVIYWAWNNTLS 566

Query: 523 LIQQTLIYK 531
           + QQ LI K
Sbjct: 567 ISQQALIMK 575