Pairwise Alignments

Query, 453 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., GTPase Der from Xanthobacter sp. DMC5

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 47/129 (36%), Positives = 72/129 (55%), Gaps = 8/129 (6%)

Query: 213 REGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAG 272
           R  +KV + GRPNAGKS+L+N L G++  +    AG TRD +  ++   G+PL + DTAG
Sbjct: 195 RRPIKVAVLGRPNAGKSTLINKLLGEDRLLTGPEAGITRDSISVNVTYAGIPLELFDTAG 254

Query: 273 LRDAS---DAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDI-WPDFVDKLPENIG 328
           LR  S   D +EK+    A   ++ A+ V+ ++D   T   + QD+   D V +  E   
Sbjct: 255 LRKRSRIDDKLEKLSAADALRAMKFAEVVVILID--ATRPFEEQDLRIADLVAR--EGRA 310

Query: 329 ITVIRNKAD 337
           + +  NKAD
Sbjct: 311 LVIGYNKAD 319



 Score = 65.9 bits (159), Expect = 3e-15
 Identities = 54/155 (34%), Positives = 76/155 (49%), Gaps = 9/155 (5%)

Query: 218 VVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS 277
           + I GRPN GKS+L N L GK+ A+V D  G TRD       +  +   I+DTAGL +A+
Sbjct: 5   LAIVGRPNVGKSTLFNRLVGKKLALVDDRPGVTRDRREGEGRLGDLTFRIVDTAGLEEAT 64

Query: 278 DAVEKIGIERAWEE--IRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNK 335
            A  + G  RA  E  I   D +LFM+D      T     + D V K  +   + ++ NK
Sbjct: 65  PASLE-GRMRAQTEAAIGDCDAILFMID-ARIGLTPTDRAFADLVRKAGK--PVILVANK 120

Query: 336 ADQTGEPLGICHVNQPTL---IRLSAKTGQGVDAL 367
           ++  G   G        L   I LSA+ G+G+  L
Sbjct: 121 SEGRGGEAGTLEAFGLGLGDPIPLSAEHGEGLSDL 155